Detailed information NTG0265564

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: DK878_RS06980
• Genome accession: NZ_CP031379
• Coordinates: 1404717..1407983 (-)
• Length: 1088 a.a.
• NCBI ID: WP_002935479.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2660
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1399717..1412983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK878_RS06970 (DK878_07205)	plsY	1400410..1401054 (+)	645	WP_009909724.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
DK878_RS06975 (DK878_07210)	rexA	1401064..1404717 (-)	3654	WP_002935480.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
DK878_RS06980 (DK878_07215)	rexB	1404717..1407983 (-)	3267	WP_002935479.1	ATP-dependent nuclease subunit B	Machinery gene
DK878_RS06985 (DK878_07220)	-	1408274..1412080 (-)	3807	WP_024409216.1	MucBP domain-containing protein	-
DK878_RS06990 (DK878_07225)	-	1412445..1412609 (-)	165	WP_002935476.1	hypothetical protein	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124436.68 Da
• Isoelectric Point: 5.0929

>NTDB_id=265564 DK878_RS06980 WP_002935479.1 1404717..1407983(-) (rexB) [Streptococcus suis strain ISU2660]
MKLVYTDIRNPLTQYLTDTSAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQRDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
ESFEHQSKLAQLTGLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQVIYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHIHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFSVNGRADYDAEVVKEKRLVYDLAVLEPLRAKIMEPLNQLFKAGPQSGATLLEKFMA
FLEAIEFPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
TPQIYNEGEDSLSPYVKILKEMGLSSEERGRIKSLSPQDIGHYKSLLSRLIESERPSLDNEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGDITSKQLAADTLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=265564 DK878_RS06980 WP_002935479.1 1404717..1407983(-) (rexB) [Streptococcus suis strain ISU2660]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATACCTCGGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTATATTGCTCCAAACTCTCTATCCTTTGAGATGGAACGCAAGGTCTTGGAATACCTGCCAGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCAATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTGCAGAGAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAAGCTTTGAGCATCAGTCTAAGTTAGCACAGTTGACTGGCTTGGTAGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTAATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGTCATCTATGCGGAAGGCAATGTCTATCAAGCCAAC
GTTGACTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGATCAAGAAA
AAATCCAGCTATGGGAAGTCGTTAACCAAAAAGAAGAGGTGGAGCAGGTAGCAACGGCAATTCGCCAACACATACACCAA
GGAGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAAATTTTTGACAA
ATATGATATTCCCTACTATTTTGGTAAGGCAGAGGAGATGAGCCATCATCCCCTAGTCCACTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTCCGTGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACTTGTTTGAGTCCTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTTCGGTCAA
TGGCAGAGCGGACTATGACGCTGAAGTCGTTAAGGAGAAAAGGCTTGTCTATGATTTGGCTGTCTTAGAACCTCTACGTG
CTAAGATTATGGAGCCTTTGAATCAGCTGTTTAAGGCTGGACCACAATCTGGAGCTACCTTGCTTGAGAAATTTATGGCA
TTTTTGGAGGCAATTGAGTTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGTGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATCTTCTTGAGAATTTTCATCAGATTTTCGGAAAAGAAAAATTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGCATGCAGGCCAGTCACTATCGCACCGTTCCTGCAACGGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATTGAGCCACACACTGCAAAGTATGTTTATGCTATCGGAATGGGCCAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTGTTGACGGAAGAAGAGATGGAAAAAGTCAATCTTGTTTCGGCAAGTTCTTCACGTTTCGATTTGG
TCAGCCGAGAGAATATTAAGAAGAACCATGCTGCCATGATGTCTCTGCTAAATGCTGCGACGGAACAGTTAGTTATTTCC
ACTCCTCAGATTTATAATGAAGGCGAAGATAGTCTTTCTCCTTATGTAAAAATTCTAAAAGAAATGGGGCTTTCGTCAGA
AGAACGTGGTCGGATTAAAAGTCTTAGTCCGCAAGACATCGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCAG
AAAGACCATCTCTTGATAATGAAGAATGGGAAGGGCAGAGGGCCTTCTGGACAGTCTTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGTGATATTACTTCTAAACAGCTTGCAGCTGATACCTTGGCTGC
TTTATATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TCCGTAATGTTCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACGGCCTTTCAACACGGGCTCTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAGCTAGATTTTGATCAAAAAGTGGATAAGGCCATCCTGCGTACGCGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAAGATGCGGATGCTCGTTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTGGTTGAAATTGATGGTCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTAGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
TGGTGTTGTGGATTACAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTAA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGAGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTATAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTCTACAAACAAGCTGCCATGGACATTCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
ACGGCGGTTGGTCAAGGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1041)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	45.059	100	0.457