Detailed information NTG0264996

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BS11774_RS14760
• Genome accession: NZ_CP026010
• Coordinates: 2799165..2799944 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis strain ATCC 11774
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 2794165..2804944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS11774_RS14740 (BS11774_14670)	trmFO	2794858..2796165 (+)	1308	WP_003244725.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BS11774_RS14745 (BS11774_14675)	xerC	2796233..2797147 (+)	915	WP_003231988.1	tyrosine recombinase XerC	-
BS11774_RS14750 (BS11774_14680)	clpQ	2797160..2797705 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
BS11774_RS14755 (BS11774_14685)	hslU	2797722..2799125 (+)	1404	WP_003245556.1	HslU--HslV peptidase ATPase subunit	-
BS11774_RS14760 (BS11774_14690)	codY	2799165..2799944 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BS11774_RS14765 (BS11774_14695)	flgB	2800324..2800713 (+)	390	WP_029726489.1	flagellar basal body rod protein FlgB	-
BS11774_RS14770 (BS11774_14700)	flgC	2800713..2801165 (+)	453	WP_003245521.1	flagellar basal body rod protein FlgC	-
BS11774_RS14775 (BS11774_14705)	fliE	2801176..2801496 (+)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
BS11774_RS14780 (BS11774_14710)	fliF	2801542..2803152 (+)	1611	WP_010886506.1	flagellar basal-body MS-ring/collar protein FliF	-
BS11774_RS14785 (BS11774_14715)	fliG	2803165..2804181 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
BS11774_RS14790 (BS11774_14720)	fliH	2804174..2804926 (+)	753	WP_003244804.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=264996 BS11774_RS14760 WP_003220850.1 2799165..2799944(+) (codY) [Bacillus subtilis strain ATCC 11774]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=264996 BS11774_RS14760 WP_003220850.1 2799165..2799944(+) (codY) [Bacillus subtilis strain ATCC 11774]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCACGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAACGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTAGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCCTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467