Detailed information NTG0026256

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SSA_RS01335
• Genome accession: NC_009009
• Coordinates: 231265..232533 (-)
• Length: 422 a.a.
• NCBI ID: WP_002911107.1
• Uniprot ID: A3CKJ1
• Organism: Streptococcus sanguinis SK36
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 226265..237533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSA_RS01300 (SSA_0233)	-	227152..228239 (+)	1088	Protein_221	AI-2E family transporter	-
SSA_RS01310 (SSA_0234)	-	228513..229028 (-)	516	WP_011836381.1	DUF308 domain-containing protein	-
SSA_RS01315	-	229248..229523 (+)	276	Protein_223	replication initiator protein	-
SSA_RS01320	-	229508..229699 (+)	192	WP_002911105.1	DUF3173 domain-containing protein	-
SSA_RS01325 (SSA_0235)	-	229701..230840 (+)	1140	WP_002911106.1	site-specific integrase	-
SSA_RS01335 (SSA_0236)	rarA	231265..232533 (-)	1269	WP_002911107.1	replication-associated recombination protein A	Machinery gene
SSA_RS01340 (SSA_0238)	-	232621..233091 (+)	471	WP_011836382.1	DUF3013 family protein	-
SSA_RS01345 (SSA_0239)	-	233101..233553 (+)	453	WP_011836383.1	NUDIX hydrolase	-
SSA_RS01350 (SSA_0240)	-	233550..234020 (+)	471	WP_002903456.1	GNAT family N-acetyltransferase	-
SSA_RS01355 (SSA_0241)	prmA	234164..235117 (+)	954	WP_032909645.1	50S ribosomal protein L11 methyltransferase	-
SSA_RS01360 (SSA_0242)	-	235118..235870 (+)	753	WP_011836384.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46637.12 Da
• Isoelectric Point: 5.6722

>NTDB_id=26256 SSA_RS01335 WP_002911107.1 231265..232533(-) (rarA) [Streptococcus sanguinis SK36]
MPENLALRMRPTDIDQIIGQQHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEVAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNDDIRTAIQ
LALTDKERGFDFPVELDDEALDFIAISTNGDLRSAYNSLDLAVLSTPEDSKGIRHITLDVMENSLQKSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQRIGFPEARILIANIV
IDLALSPKSNSAYLAMDKALADLRKNGNLPIPRHLRDGHYAGSKELGNAQDYLYPHSYSGNWVKQDYLPDKIKDANYFTP
NENGKYERALGMTKDKIDDLKK

Nucleotide

• Length: 1269 bp

>NTDB_id=26256 SSA_RS01335 WP_002911107.1 231265..232533(-) (rarA) [Streptococcus sanguinis SK36]
ATGCCAGAAAACCTCGCCCTGCGCATGCGGCCGACCGACATCGATCAGATTATCGGCCAGCAACATCTGGTCGGACCTGG
AAAAATCATCCGTCGCATGGTTGAAGCCAACCGCCTGTCCTCGATGATTCTCTACGGGCCACCTGGCATTGGCAAAACCT
CTATCGCCTCGGCTATCGCCGGCACAACAAAGTTCGCCTTTCGGACCTTTAACGCTACCGTAGATAGCAAGAAGCGCCTG
CAAGAAGTCGCTGAAGAGGCTAAATTTTCCGGCGGACTGGTGCTCCTACTGGACGAGATTCACCGTTTGGATAAAACAAA
ACAAGACTTTCTACTGCCACTATTAGAAAGCGGTCTGGTCATCATGATTGGAGCGACGACGGAAAATCCTTTCTTTTCTG
TCACCCCTGCTATTCGAAGCCGGGTTCAGATATTTGAGCTAGAACCCCTCAGCAACGACGACATCCGGACAGCCATTCAG
CTAGCCTTGACGGATAAGGAACGAGGATTTGATTTCCCAGTGGAGCTAGACGATGAAGCTTTGGATTTCATTGCCATCTC
TACCAACGGAGACCTGCGCTCCGCCTATAACTCGCTGGATCTAGCCGTACTCTCTACCCCAGAAGATAGCAAGGGCATTC
GCCACATCACGCTCGATGTCATGGAAAACAGCCTGCAAAAAAGCTATATCACCATGGATAAGGATGGGGACGGCCATTAC
GATGTCCTCTCTGCCCTGCAGAAGTCCATCCGTGGCTCCGATGTCAATGCCAGTCTCCACTACGCAGCTCGCCTCGTTGA
GGCAGGAGACCTGCCTAGCCTAGCTCGACGCCTGACCGTTATAGCTTACGAAGATATTGGCCTGGCAAATCCAGACGCAC
AAGTCCATACCGTTACAGCTCTGGAAGCAGCCCAGCGGATTGGCTTTCCTGAAGCCCGCATCCTTATTGCCAATATTGTC
ATCGATCTAGCTCTATCGCCCAAGTCCAACTCAGCCTACCTAGCCATGGACAAGGCCCTAGCTGACTTGCGAAAGAATGG
AAACCTCCCCATCCCCCGCCACTTAAGAGACGGCCACTATGCCGGCAGCAAAGAATTGGGCAATGCTCAGGATTATCTCT
ATCCTCACTCCTATTCTGGCAATTGGGTCAAGCAGGACTATCTGCCTGACAAGATAAAAGATGCCAATTATTTCACTCCT
AATGAGAATGGTAAATACGAGCGAGCCCTTGGAATGACTAAGGATAAGATTGATGACTTAAAAAAATGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-410)

3D structure

• AlphaFold DB: A3CKJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	60.386	98.104	0.592