Detailed information NTG0261176

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: SPSF3K_RS04935
• Genome accession: NZ_CP025420
• Coordinates: 983870..984739 (+)
• Length: 289 a.a.
• NCBI ID: WP_004234319.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain SPOF3K
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 978870..989739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPSF3K_RS04905 (SPSF3K_00999)	-	979119..979997 (+)	879	WP_003105640.1	F0F1 ATP synthase subunit gamma	-
SPSF3K_RS04910 (SPSF3K_01000)	atpD	980114..981520 (+)	1407	WP_004234323.1	F0F1 ATP synthase subunit beta	-
SPSF3K_RS04915 (SPSF3K_01001)	-	981533..981949 (+)	417	WP_003103020.1	F0F1 ATP synthase subunit epsilon	-
SPSF3K_RS04920 (SPSF3K_01002)	-	982075..982311 (+)	237	WP_003105566.1	DUF1146 family protein	-
SPSF3K_RS04925 (SPSF3K_01003)	murA	982376..983647 (+)	1272	WP_004234322.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SPSF3K_RS04930 (SPSF3K_01004)	-	983651..983839 (+)	189	WP_004234321.1	DNA-directed RNA polymerase subunit beta	-
SPSF3K_RS04935 (SPSF3K_01005)	endA	983870..984739 (+)	870	WP_004234319.1	DNA/RNA non-specific endonuclease	Machinery gene
SPSF3K_RS04940 (SPSF3K_01006)	pheS	985015..986058 (+)	1044	WP_003106509.1	phenylalanine--tRNA ligase subunit alpha	-
SPSF3K_RS04945 (SPSF3K_01007)	-	986144..986668 (+)	525	WP_004234315.1	GNAT family N-acetyltransferase	-
SPSF3K_RS04950 (SPSF3K_01008)	pheT	986683..989088 (+)	2406	WP_003106512.1	phenylalanine--tRNA ligase subunit beta	-
SPSF3K_RS04955 (SPSF3K_01009)	-	989313..989510 (+)	198	WP_231082312.1	PfkB family carbohydrate kinase	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 31932.66 Da
• Isoelectric Point: 9.8666

>NTDB_id=261176 SPSF3K_RS04935 WP_004234319.1 983870..984739(+) (endA) [Streptococcus parauberis strain SPOF3K]
MSNHNSKNWKNIGSLILLIFVLAGSYLSKNNVISDNNPIKQIYQSVTGESDGKPFTKDNNNPETPSKAQALTVMTSHVKN
QLVGKITWNGAGAFIINNNKTNLNAKVSSAPYANNQIKYVQGRKVPLVANALLAKSTRQYQNRNETGNGYTNWKPAGWHQ
LHGLLGEYDHAVDRGHLLGYAIVGGLKGFDASTSNPSNIATQLSWANQAADEDSTGQNYYETLIRHALDQNKRVRYRVTL
VYEGNNILSKGSHLEAKSDDGSLEFNVFIPNIQKGIKVNYQTGQVDIER

Nucleotide

• Length: 870 bp

>NTDB_id=261176 SPSF3K_RS04935 WP_004234319.1 983870..984739(+) (endA) [Streptococcus parauberis strain SPOF3K]
ATGTCAAATCACAATTCCAAAAATTGGAAAAATATAGGTAGTCTTATCTTGCTAATTTTCGTTCTAGCAGGTTCCTATCT
AAGTAAGAACAATGTCATTTCGGATAATAATCCGATTAAACAAATCTATCAATCAGTAACCGGTGAAAGTGATGGAAAGC
CTTTTACCAAGGATAATAATAACCCTGAAACGCCAAGTAAAGCTCAAGCATTGACGGTAATGACTAGTCATGTTAAAAAT
CAATTAGTTGGTAAAATTACATGGAACGGTGCGGGTGCTTTTATTATCAATAATAACAAAACAAATTTAAATGCTAAGGT
GTCTAGTGCCCCTTATGCTAATAATCAAATTAAATATGTACAAGGTCGAAAAGTGCCACTTGTCGCAAATGCCTTATTAG
CAAAGTCAACAAGACAATATCAAAATCGTAATGAAACAGGTAATGGTTACACCAATTGGAAACCTGCCGGATGGCATCAG
TTACATGGTTTGTTGGGGGAATATGACCATGCGGTGGACAGAGGTCACCTGTTAGGCTATGCCATAGTTGGTGGACTTAA
GGGGTTTGATGCCTCAACGAGTAACCCAAGCAACATAGCAACGCAATTATCATGGGCTAATCAAGCAGCAGATGAAGATT
CAACTGGTCAAAACTATTATGAGACGCTAATACGACATGCACTTGATCAAAATAAGCGTGTGCGCTATCGTGTAACTTTA
GTTTATGAAGGGAACAATATTTTATCTAAAGGAAGTCATTTGGAAGCAAAATCTGATGATGGAAGCTTAGAATTTAATGT
GTTCATTCCAAATATTCAAAAAGGAATAAAAGTCAATTATCAGACTGGTCAGGTCGATATAGAACGCTAG

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (92-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	64.159	78.201	0.502
endA	Streptococcus pneumoniae D39	64.159	78.201	0.502
endA	Streptococcus pneumoniae R6	64.159	78.201	0.502
endA	Streptococcus pneumoniae TIGR4	64.159	78.201	0.502