Detailed information NTG0258866

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: CW339_RS05570
• Genome accession: NZ_CP025216
• Coordinates: 1043155..1044036 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain DGCC 7710
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1038155..1049036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CW339_RS05545 (CW339_05545)	vicR	1038859..1039566 (-)	708	WP_011681206.1	response regulator YycF	Regulator
CW339_RS05550 (CW339_05550)	-	1040093..1040860 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
CW339_RS05555 (CW339_05555)	-	1040872..1041705 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
CW339_RS05560 (CW339_05560)	-	1041723..1042421 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
CW339_RS05565 (CW339_05565)	-	1042433..1043083 (+)	651	WP_024704148.1	amino acid ABC transporter permease	-
CW339_RS05570 (CW339_05570)	endA	1043155..1044036 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
CW339_RS05575 (CW339_05575)	-	1044098..1044286 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
CW339_RS05580 (CW339_05580)	murA	1044288..1045559 (-)	1272	WP_024704149.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
CW339_RS05585 (CW339_05585)	-	1045629..1045865 (-)	237	WP_002946959.1	DUF1146 family protein	-
CW339_RS05590 (CW339_05590)	galE	1046054..1047067 (-)	1014	WP_014621668.1	UDP-glucose 4-epimerase GalE	-
CW339_RS05595 (CW339_05595)	-	1047082..1047537 (-)	456	WP_024704150.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=258866 CW339_RS05570 WP_011681210.1 1043155..1044036(-) (endA) [Streptococcus thermophilus strain DGCC 7710]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=258866 CW339_RS05570 WP_011681210.1 1043155..1044036(-) (endA) [Streptococcus thermophilus strain DGCC 7710]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594