Detailed information NTG0258682

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: CXB48_RS13335
• Genome accession: NZ_CP025149
• Coordinates: 2785206..2787431 (-)
• Length: 741 a.a.
• NCBI ID: WP_108241970.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain SGAir0442
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2780206..2792431

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXB48_RS13300 (CXB48_13245)	murB	2780596..2781615 (-)	1020	WP_108241967.1	UDP-N-acetylmuramate dehydrogenase	-
CXB48_RS13305 (CXB48_13250)	-	2781612..2782079 (-)	468	WP_108241968.1	low molecular weight protein-tyrosine-phosphatase	-
CXB48_RS13310 (CXB48_13255)	kdsB	2782081..2782845 (-)	765	WP_108241969.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CXB48_RS13315 (CXB48_13260)	-	2782842..2783027 (-)	186	WP_049339269.1	Trm112 family protein	-
CXB48_RS13320 (CXB48_13265)	lpxK	2783073..2784077 (-)	1005	WP_049339271.1	tetraacyldisaccharide 4'-kinase	-
CXB48_RS13325 (CXB48_13270)	-	2784077..2784505 (-)	429	WP_049339273.1	ExbD/TolR family protein	-
CXB48_RS13330 (CXB48_13275)	-	2784502..2785134 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
CXB48_RS13335 (CXB48_13280)	comA	2785206..2787431 (-)	2226	WP_108241970.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CXB48_RS13340 (CXB48_13285)	-	2787577..2788092 (+)	516	WP_108241971.1	DUF2062 domain-containing protein	-
CXB48_RS13345 (CXB48_13290)	-	2788105..2789349 (-)	1245	WP_045632531.1	lipoprotein-releasing ABC transporter permease subunit	-
CXB48_RS13350 (CXB48_13295)	lolD	2789349..2790047 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
CXB48_RS13355 (CXB48_13300)	-	2790055..2791302 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
CXB48_RS13360 (CXB48_13305)	-	2791335..2791970 (+)	636	WP_014597110.1	PilZ domain-containing protein	-
CXB48_RS13365 (CXB48_13310)	-	2791974..2792282 (+)	309	WP_014597111.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80946.44 Da
• Isoelectric Point: 9.6323

>NTDB_id=258682 CXB48_RS13335 WP_108241970.1 2785206..2787431(-) (comA) [Stutzerimonas stutzeri strain SGAir0442]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSPGLLLLLP
LLFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLQTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AEQAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVIERLETLDIQAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=258682 CXB48_RS13335 WP_108241970.1 2785206..2787431(-) (comA) [Stutzerimonas stutzeri strain SGAir0442]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGTTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTGCCGGCGTCCATGGACGGTCGCACGTTCTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGAGACGCATCGGCGCCACG
GGCACGATAAAGGCAGGCGAGCGCCTGACGGCGTCGACGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTGCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTAGATGGCGTCCTGCTGATC
GATCCCCTGGTGACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCGCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGACTGCCGGTAAGTGCTAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCGTGGCCGGGGTTGGCGAAGCGCTCCTGTCAGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCCGGGTTTGCTGCTGCTATTGCCG
CTGCTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGAGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCAGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGACGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCAGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTACTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGATCGAGCGGCTCGAGACCCTCGATATCCAGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.947	96.356	0.645
comA	Ralstonia pseudosolanacearum GMI1000	37.29	100	0.39