Detailed information NTG0258233

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BVQ_RS18605
• Genome accession: NZ_CP025079
• Coordinates: 3701977..3703140 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain QST713
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3696977..3708140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVQ_RS18575 (BVQ_18550)	-	3697242..3697661 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
BVQ_RS18580 (BVQ_18555)	comFC	3697735..3698424 (-)	690	WP_199910801.1	phosphoribosyltransferase family protein	Machinery gene
BVQ_RS18585 (BVQ_18560)	-	3698430..3698714 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
BVQ_RS18590 (BVQ_18565)	comFA	3698772..3700157 (-)	1386	WP_053574011.1	DEAD/DEAH box helicase	Machinery gene
BVQ_RS18595 (BVQ_18570)	-	3700265..3701113 (-)	849	WP_053574012.1	DegV family protein	-
BVQ_RS18600 (BVQ_18575)	degU	3701211..3701900 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BVQ_RS18605 (BVQ_18580)	degS	3701977..3703140 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BVQ_RS18610 (BVQ_18585)	-	3703363..3704010 (+)	648	WP_003151384.1	YigZ family protein	-
BVQ_RS18615 (BVQ_18590)	-	3704015..3705229 (+)	1215	WP_015418337.1	LCP family protein	-
BVQ_RS18620 (BVQ_18595)	-	3705328..3706404 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BVQ_RS18625 (BVQ_18600)	tuaH	3706537..3707733 (-)	1197	WP_053574013.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=258233 BVQ_RS18605 WP_007407484.1 3701977..3703140(-) (degS) [Bacillus velezensis strain QST713]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=258233 BVQ_RS18605 WP_007407484.1 3701977..3703140(-) (degS) [Bacillus velezensis strain QST713]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951