Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   CWI64_RS11975 Genome accession   NZ_CP025076
Coordinates   956519..957550 (-) Length   343 a.a.
NCBI ID   WP_000506414.1    Uniprot ID   A0A2U3RWR6
Organism   Streptococcus pneumoniae strain BHN97x     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 951519..962550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI64_RS05105 (CWI64_05105) - 952771..953754 (-) 984 WP_033875255.1 alkanal monooxygenase -
  CWI64_RS05110 (CWI64_05110) - 953775..954857 (-) 1083 WP_033875256.1 alkanal monooxygenase -
  CWI64_RS12285 - 954903..955025 (-) 123 WP_257857867.1 hypothetical protein -
  CWI64_RS05115 (CWI64_05115) - 955031..955477 (-) 447 WP_000776587.1 LytTR family DNA-binding domain-containing protein -
  CWI64_RS05120 (CWI64_05120) - 955591..956094 (-) 504 WP_000800927.1 phosphatase PAP2 family protein -
  CWI64_RS05125 (CWI64_05125) - 956091..956453 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  CWI64_RS11975 rcrQ 956519..957550 (-) 1032 WP_000506414.1 ATP-binding cassette domain-containing protein Regulator
  CWI64_RS11980 - 957557..958378 (-) 822 Protein_957 ABC transporter permease -
  CWI64_RS05135 (CWI64_05135) - 958395..958864 (-) 470 Protein_958 MarR family winged helix-turn-helix transcriptional regulator -
  CWI64_RS05145 (CWI64_05145) - 958988..959704 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  CWI64_RS05155 (CWI64_05155) ply 960585..962000 (-) 1416 WP_001284359.1 cholesterol-dependent cytolysin pneumolysin -
  CWI64_RS05160 (CWI64_05160) - 962011..962421 (-) 411 WP_000595758.1 hypothetical protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 37844.05 Da        Isoelectric Point: 4.4301

>NTDB_id=258129 CWI64_RS11975 WP_000506414.1 956519..957550(-) (rcrQ) [Streptococcus pneumoniae strain BHN97x]
MGFLLMGALFIVLPRTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGSIRI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIACALLKDASLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=258129 CWI64_RS11975 WP_000506414.1 956519..957550(-) (rcrQ) [Streptococcus pneumoniae strain BHN97x]
ATGGGCTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTGCAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGACAGCTCATGCTGGTCAAAAGGTTGCCATTGTTG
GGCCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGGGAAGTATTCGCATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTTGTGCCCTTCTTAAGGATGCATCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCATTGCCCACC
GCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains


Predicted by InterproScan.

(68-118)

(120-265)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2U3RWR6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

80.357

65.306

0.525

  rcrP Streptococcus mutans UA159

37.572

100

0.379


Multiple sequence alignment