Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A7J09_RS06940 Genome accession   NZ_CP030015
Coordinates   1435167..1436909 (-) Length   580 a.a.
NCBI ID   WP_029174875.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1430167..1441909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS06920 (A7J09_07055) - 1430549..1431349 (+) 801 WP_029178493.1 helix-turn-helix domain-containing protein -
  A7J09_RS06925 (A7J09_07065) - 1431593..1432848 (+) 1256 WP_172411187.1 ISL3 family transposase -
  A7J09_RS06930 (A7J09_07070) mutY 1433453..1434613 (-) 1161 WP_029174898.1 A/G-specific adenine glycosylase -
  A7J09_RS06935 (A7J09_07075) - 1434791..1435183 (-) 393 WP_029681487.1 PaaI family thioesterase -
  A7J09_RS06940 (A7J09_07080) rcrQ 1435167..1436909 (-) 1743 WP_029174875.1 ABC transporter ATP-binding protein Regulator
  A7J09_RS06945 (A7J09_07085) - 1436896..1438536 (-) 1641 Protein_1339 ABC transporter ATP-binding protein -
  A7J09_RS06950 (A7J09_07090) - 1438660..1439915 (+) 1256 WP_172411187.1 ISL3 family transposase -
  A7J09_RS06955 (A7J09_07095) - 1439946..1440056 (-) 111 Protein_1341 ABC transporter ATP-binding protein -
  A7J09_RS06960 (A7J09_07100) pta 1440058..1441032 (-) 975 WP_002935239.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 64522.62 Da        Isoelectric Point: 5.0936

>NTDB_id=257969 A7J09_RS06940 WP_029174875.1 1435167..1436909(-) (rcrQ) [Streptococcus suis strain ISU2812]
MRQSSFKELVRLVLHQPLRMSLMLVGTLVQVLLTVYLPILIGQAVDAVLIANGQVLLGILGKMVMVILLNTLMQWYLPLV
TNRLVYGMVADLREQVYVKLHQMPLSYLDRQSVGDLVARFSSDSEQLTNGLLMIFNQFFIGILTIFLTIFTMARLDLTMM
LVVVALTPVSLLVARYIAKKSYGYYRQQTQARGKQSQLLEESISQLTLVQSFNAQEQFTQGFQVVNDQYATYSQQAIFAS
STVNPSTRFINAIIYALLAGLGALRIMAGNFTVGSLTTFLNYASQYSKPFNDISSVLSELQSALACADRLFAILDLDSID
DQAERKIDSEELKGAISFDNVSFSYSPDRSLIEHLDIDVKAGQKVAIVGPTGAGKSTMINLLMRFYDVTAGQIVLDGVPI
SQYSREDLRRQIGMVLQETWIKSGTIHDNIAYGYPNATRELVIEAAKAANADFFIRQLPQGYDTVLADGGEGLSQGQRQL
LSIARVFVKIPKILILDEATSSIDTRTEILVQEAFAKLMEGRTSFIIAHRLSTIQSADLILVMVDGKIVEQGNHEALMAE
QGVYYQMQTSQQTEEDESVR

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=257969 A7J09_RS06940 WP_029174875.1 1435167..1436909(-) (rcrQ) [Streptococcus suis strain ISU2812]
ATGAGACAATCTAGTTTTAAGGAACTGGTCAGATTGGTTTTACACCAGCCCCTTCGAATGTCCTTGATGTTGGTGGGAAC
TTTGGTGCAAGTCCTTCTGACAGTTTATCTGCCTATCTTGATTGGTCAGGCAGTCGATGCAGTATTGATAGCAAATGGTC
AGGTCTTGCTCGGTATCTTAGGCAAAATGGTGATGGTTATCTTGCTTAATACGCTGATGCAATGGTACTTACCTTTGGTA
ACCAATCGCTTGGTTTATGGAATGGTGGCCGACTTGCGTGAACAGGTTTATGTTAAGCTACACCAGATGCCCCTATCTTA
TCTGGATCGTCAATCAGTCGGTGATTTGGTGGCTCGTTTTTCAAGTGATAGTGAGCAATTAACAAATGGTCTCTTGATGA
TTTTCAATCAATTTTTCATTGGTATCTTGACCATTTTCCTAACCATTTTCACTATGGCTAGGCTTGACTTGACCATGATG
TTGGTTGTTGTTGCCCTGACTCCAGTTTCTCTGCTTGTGGCACGCTATATCGCTAAGAAATCCTATGGTTATTATAGACA
ACAGACTCAGGCACGTGGGAAGCAATCTCAGCTTTTGGAAGAGTCCATCAGTCAATTGACACTGGTTCAATCTTTCAATG
CTCAAGAGCAATTTACGCAAGGTTTTCAAGTTGTGAATGACCAGTATGCGACCTATTCTCAACAGGCTATCTTTGCCTCT
TCAACGGTCAATCCAAGTACGCGGTTTATCAATGCTATTATTTATGCCTTACTTGCAGGACTTGGAGCGCTGAGAATTAT
GGCAGGAAATTTTACAGTGGGATCCCTGACAACCTTCCTCAATTATGCTAGTCAGTACAGCAAGCCTTTTAATGATATTT
CCTCGGTCCTATCGGAATTGCAGAGCGCCTTAGCTTGTGCAGACAGGCTGTTTGCTATCTTGGATCTAGATAGCATTGAC
GATCAGGCTGAGCGGAAAATTGATTCAGAGGAGTTGAAGGGAGCTATTTCCTTTGATAATGTGTCTTTCTCCTATAGCCC
TGACCGTTCTCTGATAGAACATCTGGACATTGATGTCAAAGCTGGACAAAAGGTAGCCATTGTTGGACCTACTGGTGCTG
GTAAATCCACCATGATCAATCTTCTCATGCGTTTCTACGATGTGACGGCTGGTCAGATTGTCTTAGATGGGGTTCCGATT
AGCCAGTACAGTCGTGAGGATCTCCGCAGACAGATTGGGATGGTTTTACAGGAGACATGGATCAAATCTGGTACCATTCA
TGATAATATTGCCTATGGCTATCCAAATGCCACGCGGGAATTGGTCATTGAGGCGGCTAAGGCAGCTAATGCAGACTTCT
TTATTCGTCAGCTTCCACAGGGTTACGATACGGTTTTGGCAGATGGAGGAGAAGGCTTATCCCAGGGACAACGTCAGCTT
TTGTCTATTGCGCGTGTCTTTGTCAAGATACCTAAAATCCTGATTTTAGATGAGGCGACTTCCTCTATTGATACACGGAC
AGAAATTTTAGTACAGGAAGCATTTGCCAAATTGATGGAAGGACGGACCAGTTTTATTATTGCTCATCGCCTATCAACCA
TTCAATCAGCTGACTTGATTTTGGTCATGGTGGATGGAAAAATTGTTGAACAAGGGAATCATGAAGCGTTGATGGCTGAA
CAAGGCGTTTATTATCAAATGCAAACAAGTCAGCAGACAGAGGAGGATGAAAGTGTTAGATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(22-289)

ABC transporter (ABC_tran)

(354-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.153

97.759

0.383

Multiple sequence alignment