Detailed information NTG0254041

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CTI08_RS12660
• Genome accession: NZ_CP024576
• Coordinates: 2580995..2581696 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AbPK1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2575995..2586696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTI08_RS12630 (CTI08_12605)	-	2576301..2576744 (-)	444	WP_001246675.1	SRPBCC family protein	-
CTI08_RS12635 (CTI08_12610)	tadA	2576814..2577317 (-)	504	WP_047938248.1	tRNA adenosine(34) deaminase TadA	-
CTI08_RS12640 (CTI08_12615)	-	2577324..2578448 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
CTI08_RS12645 (CTI08_12620)	ung	2578445..2579158 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
CTI08_RS12650 (CTI08_12625)	-	2579209..2579805 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
CTI08_RS12655 (CTI08_12630)	gspK	2580036..2580995 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
CTI08_RS12660 (CTI08_12635)	xcpW	2580995..2581696 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CTI08_RS12665 (CTI08_12640)	xcpV	2581696..2582076 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
CTI08_RS12670 (CTI08_12645)	-	2582066..2582620 (-)	555	WP_000841373.1	type II secretion system protein	-
CTI08_RS12675 (CTI08_12650)	-	2582630..2583238 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
CTI08_RS12680 (CTI08_12655)	-	2583276..2584049 (-)	774	WP_000497298.1	TatD family hydrolase	-
CTI08_RS12685 (CTI08_12660)	-	2584067..2584408 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
CTI08_RS12690 (CTI08_12665)	-	2584420..2585400 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
CTI08_RS12695 (CTI08_12670)	kdsB	2585412..2586173 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=254041 CTI08_RS12660 WP_000594589.1 2580995..2581696(-) (xcpW) [Acinetobacter baumannii strain AbPK1]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=254041 CTI08_RS12660 WP_000594589.1 2580995..2581696(-) (xcpW) [Acinetobacter baumannii strain AbPK1]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996