Detailed information NTG0025367

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: SAUSA300_RS06210
• Genome accession: NC_007793
• Coordinates: 1259651..1260424 (+)
• Length: 257 a.a.
• NCBI ID: WP_000055337.1
• Uniprot ID: P63843
• Organism: Staphylococcus aureus subsp. aureus USA300_FPR3757
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1254651..1265424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAUSA300_RS06190 (SAUSA300_1144)	trmFO	1254995..1256302 (+)	1308	WP_000195254.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
SAUSA300_RS06195 (SAUSA300_1145)	xerC	1256719..1257615 (+)	897	WP_001015597.1	tyrosine recombinase XerC	-
SAUSA300_RS06200 (SAUSA300_1146)	hslV	1257612..1258157 (+)	546	WP_000072681.1	ATP-dependent protease subunit HslV	-
SAUSA300_RS06205 (SAUSA300_1147)	hslU	1258223..1259626 (+)	1404	WP_000379054.1	ATP-dependent protease ATPase subunit HslU	-
SAUSA300_RS06210 (SAUSA300_1148)	codY	1259651..1260424 (+)	774	WP_000055337.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
SAUSA300_RS06215	-	1260475..1260567 (+)	93	WP_001790530.1	hypothetical protein	-
SAUSA300_RS06220 (SAUSA300_1149)	rpsB	1260766..1261533 (+)	768	WP_000268484.1	30S ribosomal protein S2	-
SAUSA300_RS06225	-	1261567..1261680 (+)	114	WP_001789890.1	hypothetical protein	-
SAUSA300_RS06230 (SAUSA300_1150)	tsf	1261715..1262596 (+)	882	WP_000201387.1	translation elongation factor Ts	-
SAUSA300_RS06235 (SAUSA300_1151)	pyrH	1262733..1263455 (+)	723	WP_000057330.1	UMP kinase	-
SAUSA300_RS06240 (SAUSA300_1152)	frr	1263474..1264028 (+)	555	WP_001280006.1	ribosome recycling factor	-
SAUSA300_RS06245 (SAUSA300_1153)	-	1264401..1265171 (+)	771	WP_000473705.1	isoprenyl transferase	-

Sequence

Protein

• Length: 257 a.a.
• Molecular weight: 28755.13 Da
• Isoelectric Point: 6.0680

>NTDB_id=25367 SAUSA300_RS06210 WP_000055337.1 1259651..1260424(+) (codY) [Staphylococcus aureus subsp. aureus USA300_FPR3757]
MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSRRGKILGSSLNELLKSQRIIQMLEERHIPSEYTERLM
EVKQTESNIDIDNVLTVFPPENRELFIDSRTTIFPILGGGERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHS
EVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
FIKVKKEKFLDELEKSK

Nucleotide

• Length: 774 bp

>NTDB_id=25367 SAUSA300_RS06210 WP_000055337.1 1259651..1260424(+) (codY) [Staphylococcus aureus subsp. aureus USA300_FPR3757]
ATGAGCTTATTATCTAAAACGAGAGAGTTAAACACGTTACTTCAAAAACACAAAGGTATTGCGGTTGATTTTAAAGATGT
AGCACAAACGATTAGTAGCGTAACTGTAACAAATGTATTTATTGTATCGCGTCGAGGTAAAATTTTAGGATCGAGTCTAA
ATGAATTATTAAAAAGTCAAAGAATTATTCAAATGTTGGAAGAAAGACATATTCCAAGTGAATATACAGAACGATTAATG
GAAGTTAAACAAACAGAATCAAATATTGATATCGACAATGTATTAACAGTATTCCCACCTGAAAACAGAGAATTATTCAT
AGATAGTCGTACAACTATCTTCCCAATTTTAGGTGGAGGGGAAAGATTAGGTACATTAGTACTTGGTCGAGTACATGATG
ATTTTAATGAAAATGATTTGGTACTAGGTGAATATGCTGCTACAGTTATTGGTATGGAAATCTTACGTGAGAAGCATAGT
GAAGTAGAAAAAGAAGCGCGCGATAAAGCTGCTATTACAATGGCAATTAATTCATTATCTTATTCTGAAAAAGAAGCGAT
TGAACATATCTTTGAAGAACTTGGCGGTACGGAAGGCCTATTAATCGCATCAAAAGTTGCAGATAGAGTTGGTATTACTA
GATCTGTAATTGTAAATGCACTACGTAAATTAGAAAGTGCTGGTGTAATTGAATCACGTTCTTTAGGAATGAAAGGTACT
TTCATTAAAGTTAAAAAAGAAAAATTCTTAGATGAATTAGAAAAAAGTAAATAA

Domains

Predicted by InterProScan.

• CodY GAF-like domain (CodY) (2-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: P63843

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	64.202	100	0.642
codY	Lactococcus lactis subsp. lactis strain DGCC12653	42.802	100	0.428