Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   DF184_RS02595 Genome accession   NZ_CP029398
Coordinates   502883..503617 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain HN105     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 497883..508617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DF184_RS02570 (DF184_02570) - 498384..498692 (-) 309 WP_002938710.1 DUF1827 family protein -
  DF184_RS02575 (DF184_02575) - 498747..499208 (-) 462 WP_002938708.1 NUDIX hydrolase -
  DF184_RS02580 (DF184_02580) clpE 499394..501622 (-) 2229 WP_109371211.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  DF184_RS02585 (DF184_02585) - 501845..502075 (+) 231 WP_002938704.1 DUF1797 family protein -
  DF184_RS02590 (DF184_02590) - 502201..502890 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  DF184_RS02595 (DF184_02595) amiE 502883..503617 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  DF184_RS02600 (DF184_02600) - 503747..504595 (+) 849 WP_024385039.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  DF184_RS02605 (DF184_02605) - 504838..507027 (+) 2190 WP_109371213.1 YSIRK-type signal peptide-containing protein -
  DF184_RS02610 (DF184_02610) - 507189..507587 (+) 399 WP_044674776.1 hypothetical protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=253152 DF184_RS02595 WP_002943067.1 502883..503617(+) (amiE) [Streptococcus suis strain HN105]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=253152 DF184_RS02595 WP_002943067.1 502883..503617(+) (amiE) [Streptococcus suis strain HN105]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTAGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCAAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAAGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAACGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365