Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   DF184_RS01230 Genome accession   NZ_CP029398
Coordinates   218075..220408 (+) Length   777 a.a.
NCBI ID   WP_109371077.1    Uniprot ID   -
Organism   Streptococcus suis strain HN105     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 213075..225408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DF184_RS01210 (DF184_01210) treP 213669..215663 (-) 1995 WP_109371075.1 PTS system trehalose-specific EIIBC component -
  DF184_RS01215 (DF184_01215) treR 215897..216610 (+) 714 WP_044683691.1 trehalose operon repressor Regulator
  DF184_RS01220 (DF184_01220) - 216668..216979 (+) 312 WP_002935948.1 hypothetical protein -
  DF184_RS01225 (DF184_01225) - 216976..217524 (+) 549 WP_002935945.1 CvpA family protein -
  DF184_RS01230 (DF184_01230) mutS/mutS2 218075..220408 (+) 2334 WP_109371077.1 endonuclease MutS2 Machinery gene
  DF184_RS01235 (DF184_01235) - 220432..221085 (+) 654 WP_044673712.1 GNAT family N-acetyltransferase -
  DF184_RS01240 (DF184_01240) - 221190..221567 (+) 378 WP_029749883.1 MerR family transcriptional regulator -
  DF184_RS01245 (DF184_01245) - 221570..222424 (+) 855 WP_024402021.1 aldo/keto reductase -
  DF184_RS01250 (DF184_01250) trxA 222810..223124 (+) 315 WP_012775426.1 thioredoxin -
  DF184_RS01255 (DF184_01255) - 223265..224794 (+) 1530 WP_044668966.1 AMP-binding protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87511.21 Da        Isoelectric Point: 6.6500

>NTDB_id=253141 DF184_RS01230 WP_109371077.1 218075..220408(+) (mutS/mutS2) [Streptococcus suis strain HN105]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSISDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=253141 DF184_RS01230 WP_109371077.1 218075..220408(+) (mutS/mutS2) [Streptococcus suis strain HN105]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGTTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAGTGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATTAGAAGAAAAATCCGTGAA
GCTGAAGATCAAGTTCGTCAGGTCATGCAAGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAAATTGCAGGGGTTGTCCATGATATTTCTGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCTCAGTCTGGTCTGCCTATCTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGTG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGCAGATTTTAGCGGAGGCGGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCCCAGGAGGGGGCATCCTTGGCTATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAACGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGAGAAAATGAG
CTTAACAAGGCACGCTTGGAGGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCTAGTCTTAAGCCCCACCAGATTATTGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGACC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGTGATGACATTATCGTTACAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGCTCAAAGATGGACGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
AAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGTAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GATCAGGCCCTTCTCAATAACCTAGCCCAAGTCGATATTGTCCACGGTATTGGTACTGGAGTTATCCGAGAAGGGGTGAC
CAAGTACCTACGCCGAAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCTGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.646

100

0.404