Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AYP_RS17765 | Genome accession | NZ_CP024124 |
| Coordinates | 3631523..3631948 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain AYP-A2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3626523..3636948
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP_RS17735 (AYP_003530) | - | 3627051..3628085 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| AYP_RS17740 (AYP_003531) | - | 3628200..3629141 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| AYP_RS17745 (AYP_003532) | rplS | 3629194..3629562 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AYP_RS17750 (AYP_003533) | trmD | 3629771..3630511 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AYP_RS17755 (AYP_003534) | rimM | 3630557..3631105 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AYP_RS17760 (AYP_003535) | rpsP | 3631125..3631376 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AYP_RS17765 (AYP_003536) | pilE | 3631523..3631948 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| AYP_RS17770 (AYP_003537) | pilY2 | 3631945..3632427 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| AYP_RS17775 (AYP_003538) | pilY1 | 3632440..3636294 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=252346 AYP_RS17765 WP_000788342.1 3631523..3631948(-) (pilE) [Acinetobacter baumannii strain AYP-A2]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=252346 AYP_RS17765 WP_000788342.1 3631523..3631948(-) (pilE) [Acinetobacter baumannii strain AYP-A2]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |