Detailed information NTG0025223

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SAB_RS07980
• Genome accession: NC_007622
• Coordinates: 1612664..1613938 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102734.1
• Uniprot ID: -
• Organism: Staphylococcus aureus RF122
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1607664..1618938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAB_RS07950 (SAB1492c)	mnmA	1607906..1609024 (-)	1119	WP_000066095.1	tRNA 2-thiouridine(34) synthase MnmA	-
SAB_RS07955 (SAB1493c)	-	1609025..1610167 (-)	1143	WP_000409166.1	cysteine desulfurase family protein	-
SAB_RS07960 (SAB1494)	-	1610479..1611492 (+)	1014	WP_000985871.1	LLM class flavin-dependent oxidoreductase	-
SAB_RS07965	-	1611719..1611871 (-)	153	WP_000009239.1	SAS049 family protein	-
SAB_RS07970	-	1611911..1612057 (-)	147	WP_042852741.1	hypothetical protein	-
SAB_RS07975 (SAB1496c)	-	1612157..1612579 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
SAB_RS07980 (SAB1497)	rarA	1612664..1613938 (+)	1275	WP_000102734.1	replication-associated recombination protein A	Machinery gene
SAB_RS07985 (SAB1498c)	-	1614099..1614872 (-)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
SAB_RS07990	-	1614872..1615000 (-)	129	WP_014937034.1	hypothetical protein	-
SAB_RS07995 (SAB1499c)	aspS	1615333..1617099 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
SAB_RS08000 (SAB1500c)	hisS	1617115..1618377 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47314.86 Da
• Isoelectric Point: 8.3539

>NTDB_id=25223 SAB_RS07980 WP_000102734.1 1612664..1613938(+) (rarA) [Staphylococcus aureus RF122]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQFVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMAYFSTQSQGDVRSALNALELSVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLSLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=25223 SAB_RS07980 WP_000102734.1 1612664..1613938(+) (rarA) [Staphylococcus aureus RF122]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAATTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAGGATGAAGAGAATGGTTTAAAAACATATCAACCCAAAATTGATGAAGATGCCATGGCCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTATCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAAGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAAGTTTACCAGAAGCTAGAATACCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	68.81	99.057	0.682