Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CRH10_RS00730 Genome accession   NZ_CP023819
Coordinates   158362..160173 (-) Length   603 a.a.
NCBI ID   WP_098922251.1    Uniprot ID   A0A291T736
Organism   Faecalibacterium prausnitzii strain Indica     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 153362..165173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CRH10_RS00705 (CRH10_00705) - 153466..154479 (-) 1014 WP_098922242.1 hypothetical protein -
  CRH10_RS00710 (CRH10_00710) spoIVA 154665..156161 (+) 1497 WP_098922244.1 stage IV sporulation protein A -
  CRH10_RS00715 (CRH10_00715) - 156332..157162 (-) 831 WP_098922246.1 sugar nucleotide-binding protein -
  CRH10_RS00720 (CRH10_00720) - 157165..157476 (-) 312 WP_098922248.1 AzlD domain-containing protein -
  CRH10_RS00725 (CRH10_00725) - 157473..158234 (-) 762 WP_098922250.1 AzlC family ABC transporter permease -
  CRH10_RS00730 (CRH10_00730) rcrQ 158362..160173 (-) 1812 WP_098922251.1 ABC transporter ATP-binding protein Regulator
  CRH10_RS00735 (CRH10_00735) - 160175..162484 (-) 2310 WP_098922252.1 ABC transporter ATP-binding protein -
  CRH10_RS00740 (CRH10_00740) - 162477..162977 (-) 501 WP_242957889.1 MarR family transcriptional regulator -
  CRH10_RS00745 (CRH10_00745) - 163130..163636 (-) 507 WP_098922253.1 DUF2812 domain-containing protein -
  CRH10_RS00750 (CRH10_00750) - 163633..163950 (-) 318 WP_098922254.1 helix-turn-helix transcriptional regulator -
  CRH10_RS00755 (CRH10_00755) - 164088..164420 (-) 333 WP_005934393.1 GlsB/YeaQ/YmgE family stress response membrane protein -
  CRH10_RS00760 (CRH10_00760) nth 164417..165118 (-) 702 WP_098922255.1 endonuclease III -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 66794.24 Da        Isoelectric Point: 6.4070

>NTDB_id=250347 CRH10_RS00730 WP_098922251.1 158362..160173(-) (rcrQ) [Faecalibacterium prausnitzii strain Indica]
MPRPGKQTTERAKDFKGTLRQLLSALRQYKLSLIVVMVFAILSTIFNIAGPKILAKATTALATGWIAKLRGIGSIDFAYI
GKILLTLLAMYLCSAAFSFIQGWLMTGLSQKVCYDFRRQISEKINRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSVT
QLITSITTMIGVLIMMLSISPQMTLIALLILPVSLVLVMLVVRFSQKYFKAQQATLGIVNGQVEEVYSGHNVIKAFNREA
AVLEDFNAANDKLFESAWKSQFLSGLMQPIMNFVGNLGYVAVAIVGSIFAANGIITIGDIQAFIQYVRNFTQPIQQLAQV
SNMLQSMAAAAERVFEFLNEPEEDQLADPARRADPACIDGQVTFNHVRFGYVPEKTVIHDFSCKVQPGQKVAIVGPTGAG
KTTMVKLLMRFYDVDSGSITLNGHDIRDFDRSALREGFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAAAKAANADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARAILADNRILILDEATSSVDTRTEQRIQTAMDNLMRGRTSFVIAHRLSTI
RDADLILVMRDGDIVEQGTHDQLIEAGGFYADLYNSQFEDVVD

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=250347 CRH10_RS00730 WP_098922251.1 158362..160173(-) (rcrQ) [Faecalibacterium prausnitzii strain Indica]
ATGCCGAGACCCGGAAAACAGACCACCGAGCGCGCCAAGGATTTCAAGGGCACTCTGCGGCAGCTCCTCAGCGCATTGCG
CCAGTATAAGCTCTCCCTCATCGTTGTGATGGTCTTTGCCATCCTTTCCACCATCTTCAATATCGCAGGCCCCAAAATTC
TGGCCAAGGCCACCACGGCCCTTGCCACCGGCTGGATCGCCAAGCTGCGGGGGATCGGCAGCATCGACTTTGCCTACATC
GGCAAGATCCTGCTCACCCTGCTGGCCATGTACCTCTGCTCCGCGGCATTCAGCTTCATTCAGGGCTGGCTGATGACCGG
CCTTTCCCAGAAGGTCTGCTACGATTTCCGCCGCCAGATCAGCGAAAAGATCAACCGCCTGCCGCTGGCCTACTTTGAAA
AGCGGACGGTCGGCGAGGTGCTCTCCCGCATCACCAACGATGTGGACACCCTGGGCCAGAGCCTGAACCAGAGCGTGACC
CAGCTCATTACCAGCATTACCACCATGATCGGCGTGCTGATCATGATGCTGTCCATCAGCCCCCAAATGACCCTGATTGC
ACTGCTCATCCTGCCCGTCTCTCTGGTACTGGTGATGCTGGTGGTCAGGTTCAGCCAAAAATACTTCAAGGCCCAGCAGG
CTACCCTGGGCATTGTGAACGGTCAGGTGGAGGAGGTCTACTCCGGCCACAATGTCATCAAGGCCTTCAACCGTGAGGCT
GCCGTGCTGGAGGACTTCAACGCCGCCAACGACAAGCTGTTTGAATCCGCCTGGAAGAGCCAGTTCCTTTCCGGCCTGAT
GCAGCCCATTATGAACTTTGTGGGCAACCTGGGCTATGTGGCTGTTGCCATCGTTGGCAGCATCTTTGCCGCCAACGGCA
TCATCACCATCGGCGATATCCAGGCTTTTATCCAGTATGTCCGCAATTTCACCCAGCCCATCCAGCAGCTGGCACAGGTG
TCCAACATGCTGCAGAGCATGGCCGCCGCTGCCGAGCGCGTGTTCGAGTTCCTGAACGAGCCCGAAGAGGATCAGCTGGC
CGACCCTGCCCGCCGGGCAGACCCTGCCTGCATCGATGGCCAGGTCACCTTTAACCATGTCCGGTTCGGTTATGTGCCCG
AAAAGACCGTCATCCACGATTTCAGCTGCAAGGTGCAGCCCGGCCAGAAGGTCGCCATCGTTGGCCCCACCGGTGCCGGC
AAGACCACCATGGTCAAGCTGCTCATGCGGTTCTACGATGTAGATTCCGGCTCCATCACCCTGAACGGCCACGACATCCG
CGACTTTGACCGCAGTGCCCTGCGCGAGGGCTTCGGCATGGTGCTGCAGGACACCTGGCTGTTCAAGGGCACCATCATGG
AGAACATCCGCTATGGCCGTCTGGATGCCACCGACGAAGAGGTCATTGCCGCCGCCAAGGCCGCCAATGCCGACCACTTC
ATCCGTACCCTGCCCGGTGGCTACCAGATGGAGCTGAACGAGGACGCTTCCAACGTCAGTCAGGGCCAGAAGCAGCTGCT
GACGATCGCCCGGGCCATTCTGGCCGACAACCGCATCCTGATCCTGGACGAGGCCACCAGCAGCGTGGACACCCGCACCG
AGCAGCGCATCCAGACTGCTATGGACAACCTGATGCGGGGCCGTACCAGTTTCGTCATCGCCCACCGCCTGTCCACCATC
AGGGATGCCGACCTCATCCTTGTCATGCGGGACGGCGACATTGTGGAGCAGGGCACCCACGACCAGCTCATTGAGGCCGG
CGGTTTCTACGCTGACCTGTACAACAGCCAGTTTGAGGATGTTGTGGATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(379-527)

ABC transporter transmembrane region (ABC_membrane)

(33-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A291T736

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.448

97.347

0.501

Multiple sequence alignment