Detailed information NTG0249584

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: CPQ91_RS09030
• Genome accession: NZ_CP023729
• Coordinates: 1764104..1764883 (+)
• Length: 259 a.a.
• NCBI ID: WP_003181756.1
• Uniprot ID: A0A1Y0YKK2
• Organism: Bacillus licheniformis strain ATCC 9789
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1759104..1769883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPQ91_RS09010 (CPQ91_09010)	trmFO	1759801..1761105 (+)	1305	WP_003181748.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
CPQ91_RS09015 (CPQ91_09015)	xerC	1761172..1762086 (+)	915	WP_011197974.1	tyrosine recombinase XerC	-
CPQ91_RS09020 (CPQ91_09020)	hslV	1762100..1762645 (+)	546	WP_003181752.1	ATP-dependent protease subunit HslV	-
CPQ91_RS09025 (CPQ91_09025)	hslU	1762662..1764065 (+)	1404	WP_003181754.1	HslU--HslV peptidase ATPase subunit	-
CPQ91_RS09030 (CPQ91_09030)	codY	1764104..1764883 (+)	780	WP_003181756.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
CPQ91_RS09035 (CPQ91_09035)	flgB	1765237..1765626 (+)	390	WP_097366388.1	flagellar basal body rod protein FlgB	-
CPQ91_RS09040 (CPQ91_09040)	flgC	1765626..1766078 (+)	453	WP_009328519.1	flagellar basal body rod protein FlgC	-
CPQ91_RS09045 (CPQ91_09045)	fliE	1766092..1766409 (+)	318	WP_003181764.1	flagellar hook-basal body complex protein FliE	-
CPQ91_RS09050 (CPQ91_09050)	fliF	1766460..1768061 (+)	1602	WP_003181766.1	flagellar basal-body MS-ring/collar protein FliF	-
CPQ91_RS09055 (CPQ91_09055)	fliG	1768075..1769091 (+)	1017	WP_003181768.1	flagellar motor switch protein FliG	-
CPQ91_RS09060 (CPQ91_09060)	fliH	1769075..1769842 (+)	768	WP_009328518.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29073.42 Da
• Isoelectric Point: 4.8196

>NTDB_id=249584 CPQ91_RS09030 WP_003181756.1 1764104..1764883(+) (codY) [Bacillus licheniformis strain ATCC 9789]
MALLQKTRKINAMLQNAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGFSINQQIENDRMKKMLEERQFPEDYTKSLF
NIPETSSNLDINSEYTAFPVENRDLFQAGLTTVVPIIGGGERLGTLILSRLQEKFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLMELEKLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=249584 CPQ91_RS09030 WP_003181756.1 1764104..1764883(+) (codY) [Bacillus licheniformis strain ATCC 9789]
ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGCGGCAGGGAAGCCGGTTAATTTTAAAGAAAT
GGCCGAAACGCTTCGCGATGTGATTGATTCGAACATTTTCGTCGTCAGCCGCAGAGGAAAGCTTCTCGGTTTCTCGATCA
ACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGAAGAGCGCCAGTTTCCTGAAGATTATACAAAAAGCCTGTTC
AACATTCCGGAAACGTCATCTAACCTTGACATCAACAGCGAATACACAGCTTTCCCTGTGGAAAACCGCGATTTGTTCCA
AGCGGGTCTGACCACGGTCGTTCCGATCATCGGAGGAGGCGAAAGACTGGGCACCTTGATTCTGTCCCGCCTTCAGGAGA
AATTCGAGGATGACGATCTGATCCTTGCCGAATATGGCGCCACTGTCGTAGGAATGGAAATTCTCAGAGAGAAAGCGGAA
GAGATCGAAGAGGAAGCGCGCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCACTATCTTACAGCGAGCTTGAAGCAAT
TGAACATATTTTTGAGGAGCTTGACGGAAATGAAGGCCTGCTTGTCGCTAGTAAAATTGCAGACCGCGTCGGCATCACCC
GCTCGGTCATTGTCAACGCGCTCCGTAAACTTGAAAGCGCCGGTGTCATTGAATCAAGGTCACTAGGGATGAAAGGCACA
TACATCAAAGTGCTGAACAACAAATTTTTGATGGAGTTAGAAAAACTAAAGTCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: A0A1Y0YKK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	94.595	100	0.946
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467