Detailed information NTG0249049

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: C1A39_RS06765
• Genome accession: NZ_CP028896
• Coordinates: 1307285..1309681 (-)
• Length: 798 a.a.
• NCBI ID: WP_024703939.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CS5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1302285..1314681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1A39_RS06745 (C1A39_06970)	stkP/pknB	1302368..1304239 (-)	1872	WP_024703938.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator
C1A39_RS06750 (C1A39_06975)	-	1304239..1304976 (-)	738	WP_002946881.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
C1A39_RS06755 (C1A39_06980)	rsmB	1305020..1306342 (-)	1323	WP_014608533.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
C1A39_RS06760 (C1A39_06985)	fmt	1306332..1307267 (-)	936	WP_014608534.1	methionyl-tRNA formyltransferase	-
C1A39_RS06765 (C1A39_06990)	priA	1307285..1309681 (-)	2397	WP_024703939.1	primosomal protein N'	Machinery gene
C1A39_RS06770 (C1A39_06995)	rpoZ	1309823..1310137 (-)	315	WP_002951415.1	DNA-directed RNA polymerase subunit omega	-
C1A39_RS06775 (C1A39_07000)	gmk	1310159..1310788 (-)	630	WP_014608537.1	guanylate kinase	-
C1A39_RS06780 (C1A39_07005)	ftsY	1311014..1312405 (-)	1392	WP_014608538.1	signal recognition particle-docking protein FtsY	-
C1A39_RS06785 (C1A39_07010)	-	1312419..1313234 (-)	816	WP_011226298.1	Cof-type HAD-IIB family hydrolase	-
C1A39_RS06790 (C1A39_07015)	-	1313227..1314021 (-)	795	WP_011681412.1	HAD family hydrolase	-
C1A39_RS06795 (C1A39_07020)	-	1314206..1314583 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90730.85 Da
• Isoelectric Point: 6.7337

>NTDB_id=249049 C1A39_RS06765 WP_024703939.1 1307285..1309681(-) (priA) [Streptococcus thermophilus strain CS5]
MVLVAQIIVDVPLMQTDRPYSYLVPESMQGQITIGMRIHVPFGKGNRLLQGFVIGFGEQENVRNLPDLKPIAELLDYEPV
LNQDQLDLADQMRHTVFSYKISILKSMLPGLLNSQYDKVIMATDKLSEEERDLFLQGRDHILFSQLSKEQGQAIPRLVGS
GRVTVDYIARDKQNIKTEKHYSVQRGILETLDISQRAKKRLELRDFLLEKNEPGKLVDLHKLFSRDVVKFFIEAGALAIT
EVEVNRADSYFEKVEKTDFLELNAQQAHAVEVMTGQIGHGGKPFLLEGVTGSGKTEVYLHLIERTLAMGKTAIVLVPEIS
LTPQMTNRFISRFGDLVAIMHSGLSDGEKFDEWRKVRSGQAKVVVGARSAIFAPLDNIGAIIIDEEHEATYKQESNPRYH
ARDVALLRSKSHGAILVLGSATPSIESRARAQKGVYHFFELTERANPSAKIPQVEVVDFKDFVGRQEASDFTPPLLEKIR
ERLARKEQVVLLLNRRGYSSFVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAIPNVCPNCQSRQIRYYGTGTQ
KAYDQLTELFPEARVIRMDVDTTRKKGAHEKLLETFGSGKADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSAE
RTFQLLTQVAGRAGRADKEGEVIIQTYNPSHYAIRFAQQQDYEGFYSYEMGIRRQLAYPPYFYTVGITLSHKDEEFVVRK
SYDVMACLREHLSDKVTFLGPTPKPIARTHNLYHYQIIIKYRFEDSLEETLNRILDMTQEPENKDLRLIIDHEPQNFT

Nucleotide

• Length: 2397 bp

>NTDB_id=249049 C1A39_RS06765 WP_024703939.1 1307285..1309681(-) (priA) [Streptococcus thermophilus strain CS5]
ATGGTTTTAGTTGCACAAATAATTGTAGATGTTCCTCTAATGCAGACGGACAGGCCTTATAGTTACCTTGTACCAGAATC
CATGCAGGGGCAAATTACTATCGGTATGAGGATTCATGTGCCTTTTGGTAAAGGAAATCGTCTCTTGCAAGGGTTTGTTA
TTGGCTTTGGAGAGCAAGAAAATGTAAGAAATCTGCCAGACTTGAAGCCAATTGCGGAACTTTTGGATTATGAACCAGTC
CTTAATCAGGATCAGCTGGATTTGGCTGACCAAATGCGACACACGGTTTTTTCCTATAAGATTTCCATCTTGAAGTCTAT
GCTTCCGGGTCTCCTTAATTCACAGTATGACAAAGTTATCATGGCAACTGATAAACTGAGCGAAGAGGAGAGGGACCTTT
TTCTTCAGGGGAGAGACCATATTCTCTTCTCTCAATTGTCGAAAGAACAAGGTCAAGCCATTCCGCGTTTGGTGGGATCT
GGTCGCGTAACGGTTGATTACATTGCTAGGGATAAACAAAATATAAAAACGGAGAAACATTATAGTGTTCAAAGAGGCAT
TTTAGAGACTTTGGATATTTCGCAACGAGCCAAGAAGCGGCTGGAGTTGCGGGACTTCTTGTTAGAAAAGAATGAGCCTG
GAAAGTTAGTAGACCTGCATAAACTTTTTTCTCGAGATGTGGTGAAGTTTTTCATTGAGGCTGGAGCTCTAGCCATCACT
GAAGTTGAGGTCAATCGTGCTGATAGCTACTTTGAAAAGGTAGAGAAGACGGATTTTCTAGAGCTTAATGCTCAGCAAGC
ACATGCTGTTGAAGTAATGACAGGTCAGATTGGTCATGGTGGGAAGCCGTTCTTGTTGGAAGGAGTTACGGGGTCAGGTA
AGACTGAGGTTTACCTGCATCTTATTGAGAGAACCTTGGCTATGGGAAAAACTGCCATTGTCTTGGTTCCAGAAATTTCT
CTGACGCCACAAATGACCAATCGTTTCATCTCCCGTTTTGGTGACTTGGTAGCAATCATGCATTCAGGCTTGTCAGATGG
TGAAAAATTTGACGAGTGGCGTAAGGTTAGGTCTGGTCAAGCAAAGGTCGTTGTAGGAGCACGTTCTGCTATCTTTGCTC
CCTTGGACAATATTGGAGCAATCATTATCGATGAGGAGCACGAGGCGACCTATAAGCAGGAATCCAATCCTCGCTATCAT
GCTAGAGATGTGGCCTTGCTTAGGTCCAAAAGCCATGGCGCTATTCTTGTACTTGGTTCAGCCACGCCTTCTATTGAGTC
GCGAGCGAGGGCTCAGAAAGGGGTCTACCATTTTTTTGAATTGACGGAGAGGGCCAATCCTAGTGCTAAAATTCCGCAGG
TTGAAGTGGTGGACTTTAAGGACTTTGTCGGTAGACAAGAGGCGAGTGATTTTACGCCACCTCTCTTGGAGAAAATCCGA
GAGCGATTGGCACGTAAGGAACAAGTCGTTTTGTTGTTGAATCGTCGTGGGTATTCTTCATTTGTCATGTGTCGTGACTG
TGGCTATGTGGATGACTGTCCGAACTGTGATATTTCACTGACTTTGCATATGGATACCAAGACCATGAATTGTCACTACT
GTGATTTTCAAAAAGCTATTCCTAATGTCTGTCCTAATTGCCAGAGTCGTCAGATTCGCTATTATGGGACTGGGACACAG
AAGGCTTATGATCAATTGACGGAACTTTTTCCAGAAGCCAGAGTGATTCGTATGGATGTTGATACTACACGTAAAAAAGG
CGCTCACGAGAAACTTTTAGAGACTTTTGGGAGTGGCAAGGCTGATATTCTGCTAGGCACCCAAATGATTGCCAAGGGCT
TGGATTTTCCCAATGTTACCTTGGTAGGGGTCTTAAATGCGGATACGTCGCTAAATTTACCAGATTTTCGTTCGGCTGAG
CGCACTTTCCAGCTGTTGACTCAGGTGGCTGGTCGTGCTGGTCGTGCGGACAAGGAAGGGGAGGTTATTATTCAGACCTA
TAACCCTAGTCATTATGCCATTCGTTTTGCTCAGCAACAGGATTATGAGGGATTCTATTCCTATGAGATGGGGATTCGCC
GTCAGTTGGCCTACCCGCCATATTTTTATACGGTAGGGATCACTCTTTCCCACAAGGATGAAGAGTTTGTAGTCCGTAAG
AGCTATGATGTCATGGCTTGTTTAAGAGAACATTTGTCGGACAAGGTGACTTTCTTGGGACCAACACCAAAACCTATTGC
CCGAACACATAACCTTTATCATTATCAGATTATTATCAAATATCGTTTTGAGGATAGCTTGGAAGAGACACTTAATAGGA
TCCTTGATATGACTCAGGAACCTGAAAATAAGGATCTACGTTTGATTATCGATCATGAGCCTCAGAATTTTACCTAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (260-424)

• Primosomal protein N C-terminal domain (PriA_C) (700-794)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-109)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (513-538)

• Helicase conserved C-terminal domain (Helicase_C) (567-656)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.95	100	0.484