Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | Aba5845_RS17085 | Genome accession | NZ_CP023034 |
| Coordinates | 3539847..3540272 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain 5845 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3534847..3545272
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba5845_RS17075 (Aba5845_17065) | pilY1 | 3535501..3539355 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| Aba5845_RS17080 (Aba5845_17070) | pilY2 | 3539368..3539850 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| Aba5845_RS17085 (Aba5845_17075) | pilE | 3539847..3540272 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| Aba5845_RS17090 (Aba5845_17080) | rpsP | 3540419..3540670 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba5845_RS17095 (Aba5845_17085) | rimM | 3540690..3541238 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba5845_RS17100 (Aba5845_17090) | trmD | 3541284..3542024 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba5845_RS17105 (Aba5845_17095) | rplS | 3542233..3542601 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba5845_RS17110 (Aba5845_17100) | - | 3542654..3543595 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| Aba5845_RS17115 (Aba5845_17105) | - | 3543710..3544744 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=244384 Aba5845_RS17085 WP_000788342.1 3539847..3540272(+) (pilE) [Acinetobacter baumannii strain 5845]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=244384 Aba5845_RS17085 WP_000788342.1 3539847..3540272(+) (pilE) [Acinetobacter baumannii strain 5845]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |