Detailed information NTG0244347

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba5845_RS06370
• Genome accession: NZ_CP023034
• Coordinates: 1352942..1353643 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5845
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1347942..1358643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba5845_RS06340 (Aba5845_06330)	-	1348248..1348691 (-)	444	WP_001246675.1	SRPBCC family protein	-
Aba5845_RS06345 (Aba5845_06335)	tadA	1348761..1349264 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Aba5845_RS06350 (Aba5845_06340)	-	1349271..1350395 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Aba5845_RS06355 (Aba5845_06345)	ung	1350392..1351105 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
Aba5845_RS06360 (Aba5845_06350)	-	1351156..1351752 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba5845_RS06365 (Aba5845_06355)	gspK	1351983..1352942 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Aba5845_RS06370 (Aba5845_06360)	xcpW	1352942..1353643 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba5845_RS06375 (Aba5845_06365)	xcpV	1353643..1354023 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba5845_RS06380 (Aba5845_06370)	-	1354013..1354567 (-)	555	WP_000841373.1	type II secretion system protein	-
Aba5845_RS06385 (Aba5845_06375)	-	1354577..1355185 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba5845_RS06390 (Aba5845_06380)	-	1355223..1355996 (-)	774	WP_000497298.1	TatD family hydrolase	-
Aba5845_RS06395 (Aba5845_06385)	-	1356014..1356355 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
Aba5845_RS06400 (Aba5845_06390)	-	1356367..1357347 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Aba5845_RS06405 (Aba5845_06395)	kdsB	1357359..1358120 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=244347 Aba5845_RS06370 WP_000594589.1 1352942..1353643(-) (xcpW) [Acinetobacter baumannii strain 5845]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=244347 Aba5845_RS06370 WP_000594589.1 1352942..1353643(-) (xcpW) [Acinetobacter baumannii strain 5845]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996