Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | Aba9102_RS12440 | Genome accession | NZ_CP023029 |
| Coordinates | 2543518..2543943 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain 9102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2538518..2548943
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba9102_RS12430 (Aba9102_12405) | pilY1 | 2539174..2543028 (+) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
| Aba9102_RS12435 (Aba9102_12410) | pilY2 | 2543039..2543521 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| Aba9102_RS12440 (Aba9102_12415) | pilE | 2543518..2543943 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| Aba9102_RS12445 (Aba9102_12420) | rpsP | 2544090..2544341 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba9102_RS12450 (Aba9102_12425) | rimM | 2544361..2544909 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba9102_RS12455 (Aba9102_12430) | trmD | 2544955..2545695 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba9102_RS12460 (Aba9102_12435) | rplS | 2545903..2546271 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba9102_RS12465 (Aba9102_12440) | - | 2546323..2547264 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| Aba9102_RS12470 (Aba9102_12445) | - | 2547379..2548410 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=244284 Aba9102_RS12440 WP_000788336.1 2543518..2543943(+) (pilE) [Acinetobacter baumannii strain 9102]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=244284 Aba9102_RS12440 WP_000788336.1 2543518..2543943(+) (pilE) [Acinetobacter baumannii strain 9102]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |