Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | Aba9201_RS15360 | Genome accession | NZ_CP023020 |
| Coordinates | 3135683..3136108 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788343.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 9201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3130683..3141108
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba9201_RS15350 (Aba9201_15330) | pilY1 | 3131337..3135191 (+) | 3855 | WP_000768952.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| Aba9201_RS15355 (Aba9201_15335) | pilY2 | 3135204..3135686 (+) | 483 | WP_001046422.1 | type IV pilin protein | Machinery gene |
| Aba9201_RS15360 (Aba9201_15340) | pilE | 3135683..3136108 (+) | 426 | WP_000788343.1 | type IV pilin protein | Machinery gene |
| Aba9201_RS15365 (Aba9201_15345) | rpsP | 3136255..3136506 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba9201_RS15370 (Aba9201_15350) | rimM | 3136526..3137074 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba9201_RS15375 (Aba9201_15355) | trmD | 3137120..3137860 (+) | 741 | WP_000464596.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba9201_RS15380 (Aba9201_15360) | rplS | 3138068..3138436 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba9201_RS15385 (Aba9201_15365) | - | 3138489..3139430 (-) | 942 | WP_085943440.1 | lipase family alpha/beta hydrolase | - |
| Aba9201_RS15390 (Aba9201_15370) | - | 3139545..3140579 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15244.43 Da Isoelectric Point: 7.1297
>NTDB_id=244147 Aba9201_RS15360 WP_000788343.1 3135683..3136108(+) (pilE) [Acinetobacter baumannii strain 9201]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=244147 Aba9201_RS15360 WP_000788343.1 3135683..3136108(+) (pilE) [Acinetobacter baumannii strain 9201]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |