Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CGP88_RS08070 | Genome accession | NZ_CP022910 |
| Coordinates | 1588702..1589001 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 164 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1583702..1594001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP88_RS08045 (CGP88_01466) | gcvPA | 1584914..1586260 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CGP88_RS08050 (CGP88_01467) | gcvT | 1586280..1587371 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CGP88_RS08055 (CGP88_01468) | - | 1587530..1588054 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| CGP88_RS08060 | - | 1588044..1588190 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CGP88_RS08065 (CGP88_01469) | comGF | 1588287..1588784 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CGP88_RS08070 (CGP88_01470) | comGE | 1588702..1589001 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CGP88_RS08075 (CGP88_01471) | comGD | 1588988..1589434 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CGP88_RS08080 (CGP88_01472) | comGC | 1589412..1589723 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CGP88_RS08085 (CGP88_01473) | comGB | 1589737..1590807 (-) | 1071 | WP_115285397.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CGP88_RS08090 (CGP88_01474) | comGA | 1590779..1591753 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CGP88_RS08095 (CGP88_01475) | - | 1591805..1592428 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CGP88_RS08100 (CGP88_01476) | - | 1592425..1592754 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CGP88_RS08105 (CGP88_01477) | - | 1592754..1593740 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CGP88_RS08110 | - | 1593737..1593940 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=243363 CGP88_RS08070 WP_000844413.1 1588702..1589001(-) (comGE) [Staphylococcus aureus strain 164]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=243363 CGP88_RS08070 WP_000844413.1 1588702..1589001(-) (comGE) [Staphylococcus aureus strain 164]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |