Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CGP93_RS08045 | Genome accession | NZ_CP022897 |
| Coordinates | 1607565..1607864 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844415.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 128 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1602565..1612864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP93_RS08020 (CGP93_01478) | gcvPA | 1603777..1605123 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CGP93_RS08025 (CGP93_01479) | gcvT | 1605143..1606234 (-) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CGP93_RS08030 (CGP93_01480) | - | 1606393..1606917 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| CGP93_RS08035 | - | 1606907..1607053 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CGP93_RS08040 (CGP93_01481) | comGF | 1607150..1607647 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CGP93_RS08045 (CGP93_01482) | comGE | 1607565..1607864 (-) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| CGP93_RS08050 (CGP93_01483) | comGD | 1607851..1608297 (-) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CGP93_RS08055 (CGP93_01484) | comGC | 1608275..1608586 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CGP93_RS08060 (CGP93_01485) | comGB | 1608600..1609670 (-) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CGP93_RS08065 (CGP93_01486) | comGA | 1609642..1610616 (-) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CGP93_RS08070 (CGP93_01487) | - | 1610668..1611291 (-) | 624 | WP_047213494.1 | MBL fold metallo-hydrolase | - |
| CGP93_RS08075 (CGP93_01488) | - | 1611288..1611617 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CGP93_RS08080 (CGP93_01489) | - | 1611617..1612603 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| CGP93_RS08085 | - | 1612600..1612803 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11135.28 Da Isoelectric Point: 9.9215
>NTDB_id=242903 CGP93_RS08045 WP_000844415.1 1607565..1607864(-) (comGE) [Staphylococcus aureus strain 128]
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=242903 CGP93_RS08045 WP_000844415.1 1607565..1607864(-) (comGE) [Staphylococcus aureus strain 128]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |