Detailed information NTG0240588

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: CG712_RS07065
• Genome accession: NZ_CP022547
• Coordinates: 1331770..1332708 (+)
• Length: 312 a.a.
• NCBI ID: WP_011226817.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain B59671
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1326770..1337708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG712_RS07045 (CG712_07095)	-	1328431..1329438 (+)	1008	Protein_1320	peptide ABC transporter substrate-binding protein	-
CG712_RS07050 (CG712_07100)	-	1329446..1329664 (+)	219	Protein_1321	ABC transporter permease subunit	-
CG712_RS07055 (CG712_07105)	-	1329675..1330709 (+)	1035	Protein_1322	ABC transporter permease	-
CG712_RS07060 (CG712_07110)	-	1330723..1331768 (+)	1046	Protein_1323	ABC transporter ATP-binding protein	-
CG712_RS07065 (CG712_07115)	amiF	1331770..1332708 (+)	939	WP_011226817.1	ABC transporter ATP-binding protein	Regulator
CG712_RS10425	-	1332930..1333118 (+)	189	WP_232510004.1	hypothetical protein	-
CG712_RS07075 (CG712_07125)	hslO	1333265..1334131 (+)	867	WP_002949275.1	Hsp33 family molecular chaperone HslO	-
CG712_RS07080 (CG712_07130)	dusB	1334124..1335101 (+)	978	WP_198401231.1	tRNA dihydrouridine synthase DusB	-
CG712_RS07085 (CG712_07135)	-	1335304..1336140 (+)	837	WP_096811811.1	Rgg/GadR/MutR family transcriptional regulator	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 35298.86 Da
• Isoelectric Point: 6.0546

>NTDB_id=240588 CG712_RS07065 WP_011226817.1 1331770..1332708(+) (amiF) [Streptococcus thermophilus strain B59671]
MTQERKKLVELKNVSLTFNKGKSNEVEAIDDVSFDIYEGEIFGLVGESGSGKTTIGRSVLKLSDIDSGTVTFSGNEISSL
KGKDLHDFRKTDQMIFQDPQSSLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELIDLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNHHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGENRQMYEIRPGHFVYATEAEAKNYKEEAKSN

Nucleotide

• Length: 939 bp

>NTDB_id=240588 CG712_RS07065 WP_011226817.1 1331770..1332708(+) (amiF) [Streptococcus thermophilus strain B59671]
ATGACACAAGAACGTAAAAAGTTAGTAGAACTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAGGTTGA
GGCTATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTTGGACTAGTTGGAGAATCTGGATCAGGTAAAACAA
CCATTGGGCGATCTGTTTTAAAACTTTCTGATATTGATTCGGGTACTGTTACCTTTTCAGGTAATGAGATATCAAGTTTA
AAAGGGAAAGATCTTCATGATTTCCGTAAGACAGATCAGATGATCTTTCAAGATCCTCAATCTAGTCTTAATGGACGCAT
GAAAATCCGTGATATTATTGCTGAAGGCATTGATATTCATAAATTGGCTAAATCTAAGGAAGAGCGTGAAGCTAAGGTTA
AAGAACTCATTGATTTGGTAGGGTTAAATGAAGATCACCTATCAAGATATCCTCATGAGTTTTCTGGTGGTCAACGTCAA
AGAATTGGTATTGCGCGTGCTTTAGCGGTTAATCATCATTTTATTGTAGCAGACGAACCGATTTCTGCTTTGGATGTTTC
TATTCAAGCACAAGTGGTTAATTTGATGCAGAAGTTGCAACATGAACAGGGGTTAACTTATTTGTTTATTGCCCATGACC
TATCGATGGTTAAATATATATCCGATCGTATTGGTGTAATGCATTGGGGTAAACTTCTTGAAGTGGGACCAGCAGATGAG
ATCTATCATAACCCGATTCATCCTTATACAAAGAGTCTATTATCTGCAATTCCAGAACCAGATCCAGAAAGAGAGCGTAA
GCGTCAGCATTTGATTTACGATTCCTCTATTGAAAATGATGGGGAAAATAGACAAATGTATGAAATCCGACCAGGGCATT
TTGTTTATGCTACAGAAGCAGAGGCTAAAAATTATAAAGAAGAAGCCAAGTCTAATTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.443	97.756	0.522
amiF	Streptococcus thermophilus LMG 18311	53.115	97.756	0.519
amiF	Streptococcus salivarius strain HSISS4	52.787	97.756	0.516