Detailed information NTG0239984

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C7M26_RS21735
• Genome accession: NZ_CP028212
• Coordinates: 4161488..4162753 (-)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102748
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4156488..4167753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M26_RS21710 (C7M26_04277)	yrzK	4156728..4156898 (+)	171	WP_004399157.1	YrzK family protein	-
C7M26_RS21715 (C7M26_04278)	hisS	4157280..4158554 (+)	1275	WP_032722254.1	histidine--tRNA ligase	-
C7M26_RS21720 (C7M26_04279)	aspS	4158568..4160346 (+)	1779	WP_032722253.1	aspartate--tRNA ligase	-
C7M26_RS21730 (C7M26_04280)	tcdA	4160682..4161446 (+)	765	WP_032722252.1	tRNA threonylcarbamoyladenosine dehydratase	-
C7M26_RS21735 (C7M26_04281)	rarA	4161488..4162753 (-)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
C7M26_RS21740 (C7M26_04282)	cymR	4162956..4163372 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C7M26_RS21745 (C7M26_04283)	iscSA	4163391..4164530 (+)	1140	WP_032722251.1	cysteine desulfurase family protein	-
C7M26_RS21750 (C7M26_04284)	mnmA	4164561..4165676 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
C7M26_RS21755 (C7M26_04285)	yrrB	4165762..4166382 (+)	621	WP_202926392.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=239984 C7M26_RS21735 WP_015714437.1 4161488..4162753(-) (rarA) [Bacillus subtilis strain SRCM102748]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=239984 C7M26_RS21735 WP_015714437.1 4161488..4162753(-) (rarA) [Bacillus subtilis strain SRCM102748]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998