Detailed information NTG0239750

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C7M23_RS10710
• Genome accession: NZ_CP028209
• Coordinates: 2080939..2082204 (-)
• Length: 421 a.a.
• NCBI ID: WP_131227724.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102745
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2075939..2087204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M23_RS10685 (C7M23_02100)	yrzK	2076181..2076351 (+)	171	WP_004399157.1	YrzK family protein	-
C7M23_RS10690 (C7M23_02101)	hisS	2076733..2078007 (+)	1275	WP_131227729.1	histidine--tRNA ligase	-
C7M23_RS10695 (C7M23_02102)	aspS	2078021..2079799 (+)	1779	WP_003229758.1	aspartate--tRNA ligase	-
C7M23_RS10705 (C7M23_02103)	tcdA	2080134..2080898 (+)	765	WP_131227727.1	tRNA threonylcarbamoyladenosine dehydratase	-
C7M23_RS10710 (C7M23_02104)	rarA	2080939..2082204 (-)	1266	WP_131227724.1	replication-associated recombination protein A	Machinery gene
C7M23_RS10715 (C7M23_02105)	cymR	2082407..2082823 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C7M23_RS10720 (C7M23_02106)	iscSA	2082842..2083984 (+)	1143	WP_131227722.1	cysteine desulfurase family protein	-
C7M23_RS10725 (C7M23_02107)	mnmA	2084012..2085127 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
C7M23_RS10730 (C7M23_02108)	yrrB	2085213..2085833 (+)	621	WP_015251572.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46530.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=239750 C7M23_RS10710 WP_131227724.1 2080939..2082204(-) (rarA) [Bacillus subtilis strain SRCM102745]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALTDIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=239750 C7M23_RS10710 WP_131227724.1 2080939..2082204(-) (rarA) [Bacillus subtilis strain SRCM102745]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATCGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGACAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995