Detailed information NTG0239474

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C7M16_RS12285
• Genome accession: NZ_CP028201
• Coordinates: 2437413..2438678 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102753
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2432413..2443678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M16_RS12265 (C7M16_02419)	yrrB	2433783..2434403 (-)	621	WP_230488347.1	tetratricopeptide repeat protein	-
C7M16_RS12270 (C7M16_02420)	mnmA	2434489..2435604 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
C7M16_RS12275 (C7M16_02421)	iscSA	2435632..2436774 (-)	1143	WP_014477512.1	cysteine desulfurase family protein	-
C7M16_RS12280 (C7M16_02422)	cymR	2436793..2437209 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C7M16_RS12285 (C7M16_02423)	rarA	2437413..2438678 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
C7M16_RS12290 (C7M16_02424)	tcdA	2438718..2439482 (-)	765	WP_070547595.1	tRNA threonylcarbamoyladenosine dehydratase	-
C7M16_RS12300 (C7M16_02425)	aspS	2439818..2441596 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
C7M16_RS12305 (C7M16_02426)	hisS	2441610..2442884 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
C7M16_RS12310 (C7M16_02427)	yrzK	2443266..2443436 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=239474 C7M16_RS12285 WP_015714437.1 2437413..2438678(+) (rarA) [Bacillus subtilis strain SRCM102753]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=239474 C7M16_RS12285 WP_015714437.1 2437413..2438678(+) (rarA) [Bacillus subtilis strain SRCM102753]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCAGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCTCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCTTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCAAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998