Detailed information NTG0239382

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M16_RS00595
• Genome accession: NZ_CP028201
• Coordinates: 109486..110607 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102753
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 104486..115607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M16_RS00570 (C7M16_00109)	ycdA	104491..105555 (-)	1065	WP_160221320.1	DUF4352 domain-containing protein	-
C7M16_RS00575	-	105578..105709 (-)	132	WP_003246334.1	hypothetical protein	-
C7M16_RS00580 (C7M16_00110)	ycdB	105883..107304 (+)	1422	WP_160221321.1	YcdB/YcdC domain-containing protein	-
C7M16_RS00585 (C7M16_00111)	ycdC	107491..108852 (+)	1362	WP_160221322.1	YcdB/YcdC domain-containing protein	-
C7M16_RS00590 (C7M16_00112)	cwlK	108860..109363 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C7M16_RS00595 (C7M16_00113)	rapF	109486..110607 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C7M16_RS00600 (C7M16_00114)	ycdF	110714..111490 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
C7M16_RS00605 (C7M16_00115)	ycdG	111515..113200 (+)	1686	WP_080528888.1	alpha-glucosidase	-
C7M16_RS00610 (C7M16_00116)	znuA	113388..114347 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C7M16_RS00615 (C7M16_00117)	znuC	114402..115097 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=239382 C7M16_RS00595 WP_015715201.1 109486..110607(+) (rapF) [Bacillus subtilis strain SRCM102753]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=239382 C7M16_RS00595 WP_015715201.1 109486..110607(+) (rapF) [Bacillus subtilis strain SRCM102753]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATTTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAACTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405