Detailed information NTG0023937

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: TRNA_RS35750
• Genome accession: NC_006270
• Coordinates: 2767815..2769080 (+)
• Length: 421 a.a.
• NCBI ID: WP_011198157.1
• Uniprot ID: Q65GR6
• Organism: Bacillus licheniformis DSM 13 = ATCC 14580
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2762815..2774080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRNA_RS35730 (BL02038)	-	2763696..2764346 (-)	651	WP_003183935.1	tetratricopeptide repeat protein	-
TRNA_RS35735 (BL02039)	mnmA	2764440..2765558 (-)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
TRNA_RS35740 (BL02040)	-	2765664..2766803 (-)	1140	WP_009327778.1	cysteine desulfurase family protein	-
TRNA_RS35745 (BL02041)	cymR	2766824..2767240 (-)	417	WP_009327777.1	cysteine metabolism transcriptional regulator CymR	-
TRNA_RS35750 (BL05286)	rarA	2767815..2769080 (+)	1266	WP_011198157.1	replication-associated recombination protein A	Machinery gene
TRNA_RS35755 (BL05287)	-	2769161..2769925 (-)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
TRNA_RS35760 (BL05288)	aspS	2770345..2772123 (-)	1779	WP_003183949.1	aspartate--tRNA ligase	-
TRNA_RS35765 (BL01122)	hisS	2772138..2773412 (-)	1275	WP_003183951.1	histidine--tRNA ligase	-
TRNA_RS43645 (BL05289)	-	2773787..2773951 (-)	165	WP_003183953.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46344.32 Da
• Isoelectric Point: 7.6230

>NTDB_id=23937 TRNA_RS35750 WP_011198157.1 2767815..2769080(+) (rarA) [Bacillus licheniformis DSM 13 = ATCC 14580]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKSFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=23937 TRNA_RS35750 WP_011198157.1 2767815..2769080(+) (rarA) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCCCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAAGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

3D structure

• AlphaFold DB: Q65GR6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.748	100	0.857