Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CGC63_RS04880 Genome accession   NZ_CP022413
Coordinates   970415..972241 (+) Length   608 a.a.
NCBI ID   WP_004223160.1    Uniprot ID   C9LBK5
Organism   Blautia hansenii DSM 20583     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 965415..977241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGC63_RS04865 (CGC63_04845) - 966377..967597 (+) 1221 WP_004223170.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  CGC63_RS04870 (CGC63_04850) - 967846..968292 (+) 447 WP_009246802.1 MarR family winged helix-turn-helix transcriptional regulator -
  CGC63_RS04875 (CGC63_04855) - 968311..970422 (+) 2112 WP_004223164.1 ABC transporter ATP-binding protein -
  CGC63_RS04880 (CGC63_04860) rcrQ 970415..972241 (+) 1827 WP_004223160.1 ABC transporter ATP-binding protein Regulator
  CGC63_RS04885 (CGC63_04865) - 972368..973084 (+) 717 WP_004223157.1 polyphosphate polymerase domain-containing protein -
  CGC63_RS04890 (CGC63_04870) - 973102..973719 (+) 618 WP_004223154.1 DUF4956 domain-containing protein -
  CGC63_RS04895 (CGC63_04875) - 973735..974319 (+) 585 WP_009246800.1 MBL fold metallo-hydrolase -
  CGC63_RS04900 (CGC63_04880) - 974339..974980 (+) 642 WP_004223145.1 DUF4956 domain-containing protein -
  CGC63_RS04905 (CGC63_04885) - 975017..975685 (+) 669 WP_004223142.1 sigma factor -
  CGC63_RS04910 (CGC63_04890) - 975675..976514 (+) 840 WP_004223141.1 anti-sigma factor domain-containing protein -
  CGC63_RS04915 (CGC63_04895) - 976700..977221 (-) 522 WP_004223139.1 shikimate kinase -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 68099.81 Da        Isoelectric Point: 6.6767

>NTDB_id=239261 CGC63_RS04880 WP_004223160.1 970415..972241(+) (rcrQ) [Blautia hansenii DSM 20583]
MSSGRPRGHGGHMSAEKAKDFKTAMKRLLNYMKRYRLQLVVMMVFAVGSTIFNIVGPKVLGKATTELYEGLVSKISGGAG
IDFGKIGEILLFALGLYLISSAFSFIQGFIMTGISNQVTYNLRKDISVKINKIPLKYFESRTHGEILSRITNDIDTLQTS
INQSFTQLITSVTMLIGVLIMMLSINVYMTVAAILILPISMMIIGKVMKHSQKYFQQQQKYLGEVNGQVEEIYSGHNVVK
AFNKEEDVIREFEKTNEKLYTTGWRSQFFSGMMMPIMQFVGNLGYVMVALLGGFLVIKEKVMVGDIQAFFQYIRNFTQPI
QQIAQVTNMLQSSAAAAERVFEFLDEEEEDQTVENPVDITTIEGNVEARHVAFGYQPEHLIIHDFSGDVKAGQKVAIVGP
TGAGKTTMIKLLMRFYDVNSGEILIDGHNIKDFNRIQLRELFGMVLQETWLFHGTIMENIRYGRLDATDEEVIAAAKAAH
AHHFIMSQPGGYQMVLNEETSNISQGQKQLLTIARAILADNKILILDEATSSVDTRTEERIQAAMDNLMKGRTSFVIAHR
LSTIRDADLILVMKDGDIIEQGTHQSLLAANGFYANLYNSQFEKAESI

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=239261 CGC63_RS04880 WP_004223160.1 970415..972241(+) (rcrQ) [Blautia hansenii DSM 20583]
ATGAGTAGTGGAAGACCAAGAGGACATGGAGGACACATGTCCGCAGAAAAAGCCAAAGATTTTAAAACAGCAATGAAAAG
GCTGTTAAACTATATGAAGCGTTACAGACTTCAGCTTGTCGTGATGATGGTATTTGCAGTGGGAAGTACGATTTTCAACA
TTGTAGGTCCTAAGGTTTTGGGAAAGGCAACCACCGAGCTGTATGAAGGGCTGGTTTCCAAGATAAGCGGAGGGGCAGGC
ATTGATTTTGGAAAAATCGGTGAAATTCTTCTGTTTGCATTGGGCTTGTATTTAATCAGCTCTGCCTTCTCTTTTATTCA
GGGCTTTATTATGACGGGAATTTCCAATCAGGTTACTTATAATCTGAGAAAAGACATTTCCGTAAAAATCAATAAAATAC
CTTTGAAATACTTTGAGAGCAGAACACACGGAGAAATTTTATCACGTATTACCAATGATATTGATACCTTGCAGACCAGT
ATTAACCAGAGCTTTACCCAGTTGATTACCTCTGTTACCATGCTGATTGGTGTTCTGATTATGATGCTGTCCATTAACGT
ATATATGACTGTGGCGGCAATTCTGATTTTGCCGATTTCCATGATGATTATCGGAAAAGTCATGAAACATTCGCAGAAAT
ATTTCCAGCAGCAGCAGAAATATCTGGGAGAAGTCAATGGGCAGGTGGAAGAAATTTACAGCGGTCACAACGTAGTCAAA
GCATTTAACAAAGAAGAAGATGTTATCCGTGAATTTGAGAAAACCAATGAAAAGCTGTATACCACAGGATGGCGTTCTCA
GTTTTTCTCAGGAATGATGATGCCGATTATGCAGTTTGTGGGAAATCTGGGATATGTTATGGTAGCTCTTTTAGGCGGAT
TTTTAGTAATTAAAGAAAAGGTTATGGTAGGTGATATTCAGGCATTTTTCCAGTATATCCGAAATTTTACCCAGCCAATC
CAGCAGATTGCGCAGGTTACTAATATGCTTCAGTCATCCGCAGCGGCGGCAGAGCGTGTCTTTGAATTTTTAGATGAGGA
AGAAGAAGACCAGACAGTGGAAAATCCTGTGGATATCACAACCATAGAGGGAAACGTAGAAGCCCGTCACGTTGCGTTTG
GCTATCAGCCGGAGCATTTGATTATTCACGACTTCAGCGGTGATGTGAAGGCAGGACAGAAGGTTGCCATTGTAGGACCG
ACCGGAGCAGGAAAAACTACCATGATTAAACTTTTAATGCGCTTCTATGATGTAAATTCCGGTGAAATTCTCATTGACGG
TCATAACATTAAAGATTTTAACCGCATTCAGTTAAGAGAATTATTCGGAATGGTATTACAGGAAACATGGCTGTTCCACG
GAACAATTATGGAAAATATCCGCTATGGACGCTTGGATGCCACGGATGAAGAGGTTATTGCAGCGGCAAAGGCAGCGCAT
GCCCATCACTTTATTATGTCCCAGCCGGGAGGCTATCAGATGGTTTTAAATGAAGAAACCAGCAATATTTCACAGGGACA
GAAGCAGCTTCTTACCATTGCAAGAGCGATTTTGGCTGACAATAAAATCTTGATTTTAGATGAGGCAACTTCCTCCGTAG
ATACCAGAACAGAGGAGCGTATTCAGGCAGCTATGGATAACCTGATGAAAGGCAGAACCAGCTTTGTCATCGCACACAGA
TTATCAACCATTCGTGATGCAGACTTAATTCTGGTTATGAAAGACGGAGATATTATTGAACAGGGAACACATCAGTCCCT
TTTGGCAGCGAACGGATTTTATGCAAATCTGTATAACAGTCAGTTTGAAAAAGCGGAAAGCATATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(383-531)

ABC transporter transmembrane region (ABC_membrane)

(40-319)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C9LBK5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.119

95.559

0.488

Multiple sequence alignment