Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   STU_RS11755 Genome accession   NC_006448
Coordinates   413470..415284 (+) Length   604 a.a.
NCBI ID   WP_011225560.1    Uniprot ID   Q5M5N3
Organism   Streptococcus thermophilus LMG 18311     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 408470..420284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STU_RS11730 (stu0428) - 408544..409296 (-) 753 Protein_371 NUDIX domain-containing protein -
  STU_RS11735 (stu0429) - 409360..410466 (-) 1107 WP_011225557.1 AAA family ATPase -
  STU_RS11740 (stu0430) gdhA 410810..412162 (+) 1353 WP_011680803.1 NADP-specific glutamate dehydrogenase -
  STU_RS11745 (stu0431) - 412421..412831 (+) 411 WP_011225559.1 peptide deformylase -
  STU_RS11750 (stu0432) rcrR 413023..413466 (+) 444 WP_002945408.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  STU_RS11755 (stu0433) rcrP 413470..415284 (+) 1815 WP_011225560.1 ABC transporter ATP-binding protein Regulator
  STU_RS11760 (stu0434) rcrQ 415274..417052 (+) 1779 WP_011225561.1 ABC transporter ATP-binding protein Regulator
  STU_RS19145 (stu0435) - 417208..417456 (+) 249 WP_011225562.1 hypothetical protein -
  STU_RS20420 (stu0437) - 417601..418764 (+) 1164 Protein_379 sensor histidine kinase -
  STU_RS11770 (stu0438) pyrH 419000..419737 (+) 738 WP_011225564.1 UMP kinase -

Sequence


Protein


Download         Length: 604 a.a.        Molecular weight: 67091.74 Da        Isoelectric Point: 5.4286

>NTDB_id=23913 STU_RS11755 WP_011225560.1 413470..415284(+) (rcrP) [Streptococcus thermophilus LMG 18311]
MFKIFKRLTAKELSMIVLAVIFVCLNVYLNLKIPDYMSDIITLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
SFLAARTASSFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQMALTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMEDKVHLFSDMVVYSSYAMQVVMGFMMMMVVFFLLP
RAVVAAGRINEVLDTQSSVSYPEYSSEKPKEVGTVEFEDVSFRYSETSEPVLEHVSFKAKKGDTVALIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRYYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQDMTKLIVAQRISTIMDA
DQILVLDKGKVVGQGTHEELLANNEVYQEIAYSQLSKEELEDGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=23913 STU_RS11755 WP_011225560.1 413470..415284(+) (rcrP) [Streptococcus thermophilus LMG 18311]
ATGTTTAAAATTTTTAAACGTTTGACGGCAAAAGAGTTAAGTATGATTGTCTTAGCTGTGATATTTGTTTGTTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGACATTATAACCCTCTTATCAACCAAGGGGACTAAGGCATCGGATA
TTTTTGCTTGGAATACGGATGCCCCAGGGATGCGAATGCTTTTAATGTCTTTTGCGGGCTTTATGGCCTCTGTAGTGGTT
AGTTTTCTAGCTGCCAGAACAGCATCTAGTTTTACCACTCGTCTTCGTGATGATATCTTCCATCAGGTTTTAGATTTTTC
GGATGCCGAGATTAAGAAATTCTCTATTCCTAGTCTTTTGACCCGTACGACAAACGATATTACACAATTACAGATGGCAC
TGACCATGGGGTTACAGGTTATTACACAGGGACCTATTATGGCAATCTGGGCTATTACAAAGATTGCTGATAAAAATGGT
AATTGGCTTCTTGCCTTGCTTGTGGCTGTGGCAGTAATTGCCATTCTTATGCTCTTCCTCTTGATTATGGTCATGCCTAA
GCAACGTTTGATTCAGACTCTGACAGATAAACTCAATAGTGTGACGCGTGAATCTCTTACTGGGATTCGTGTGGTGCGTG
CCTATAACGCCGAGAGTTATCAAGAGGATAAGTTTGAAAAGGCCAATACTGATCTAACCCAAAACAATCTTTTCATCGGT
CGTTCTTTTGCCTTGCTGACACCGGTAATGACTGCTGTATCTAGTGGTTTGACGCTAGCTATTTATTGGATTGGTGCACA
TCTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCCATGGAAGACAAGGTTCATCTCTTCTCAG
ACATGGTGGTTTACTCATCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATGGTTGTCTTCTTCCTTCTTCCA
CGAGCAGTTGTAGCAGCTGGACGTATCAATGAAGTTTTAGATACTCAATCTTCAGTTTCTTACCCTGAATATAGTTCTGA
AAAGCCTAAAGAAGTCGGAACTGTTGAATTTGAAGACGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGAGATACGGTTGCTCTTATTGGTTCGACTGGATCTGGTAAATCAACTCTTGTCAAC
CTTATCCCACGTTTTTACGATGCAACGCAAGGAACTATAAAGGTCGATGGTGTAGATGTGAGATATTACGATCACGAAAC
CTTGCACAATATTGTTGGTTATATCCCACAAAAGGCAGTACTTTTCTCAGGGGACATCACGTCAAATATGACGATGGGAA
CCAGCAATAACAGCCCTCTTGATGACGCTAAAATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAGGCAGAAGTGGCTCAAGCTGGGTCTAACTTCTCAGGTGGTCAGAAACAACGTCTGGCTATTGC
GCGTGCACTTGCCCGTAAGCCTGAAATCTTGATCTTTGACGATTCCTTCTCAGCTTTGGACTATAAGACCGATCGCAAGT
TGCGTCAAGAATTGGCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCGCAACGCATCTCTACTATTATGGATGCT
GACCAAATCTTAGTTCTTGATAAAGGTAAGGTCGTTGGTCAAGGAACCCACGAGGAACTCTTGGCTAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAGATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5M5N3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.603

100

0.677


Multiple sequence alignment