Detailed information
Bioinformatically predicted
Overview
| Name | ctsG | Type | Machinery gene |
| Locus tag | CAV_RS05940 | Genome accession | NZ_CP022347 |
| Coordinates | 1163394..1163960 (+) | Length | 188 a.a. |
| NCBI ID | WP_094325609.1 | Uniprot ID | A0A222MY56 |
| Organism | Campylobacter avium LMG 24591 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1158394..1168960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAV_RS05915 (CAV_1174) | - | 1158823..1159176 (+) | 354 | WP_094325604.1 | hypothetical protein | - |
| CAV_RS05920 (CAV_1175) | - | 1159187..1159915 (+) | 729 | WP_094325605.1 | phosphatidate cytidylyltransferase | - |
| CAV_RS05925 (CAV_1176) | dxr | 1159912..1160997 (+) | 1086 | WP_094325606.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| CAV_RS05930 (CAV_1177) | - | 1160987..1162381 (+) | 1395 | WP_094325607.1 | M99 family carboxypeptidase catalytic domain-containing protein | - |
| CAV_RS05935 (CAV_1178) | tsaD | 1162378..1163385 (+) | 1008 | WP_094325608.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| CAV_RS05940 (CAV_1179) | ctsG | 1163394..1163960 (+) | 567 | WP_094325609.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CAV_RS05945 (CAV_1180) | - | 1163957..1164475 (-) | 519 | WP_157676338.1 | phospholipid:lipid A palmitoyltransferase | - |
| CAV_RS05950 (CAV_1181) | lolA | 1164486..1164992 (-) | 507 | WP_094325611.1 | LolA-like outer membrane lipoprotein chaperone | - |
| CAV_RS05955 (CAV_1182) | secA | 1165093..1167687 (+) | 2595 | WP_094325612.1 | preprotein translocase subunit SecA | - |
| CAV_RS05960 (CAV_1183) | - | 1167645..1168874 (+) | 1230 | WP_245807394.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20540.64 Da Isoelectric Point: 6.9554
>NTDB_id=238575 CAV_RS05940 WP_094325609.1 1163394..1163960(+) (ctsG) [Campylobacter avium LMG 24591]
MRKAFTVLELIFVIVILGILAAIALPRFSSSKDEAEISKALSNLKTMISDFNTYALKNDELSSTGVMSSISAIENVDLNN
ISLKEVNFKVSNDDECLKLIFMNESNILAFGIASNDNVKNLIQNLIRLQNQAIDKAKDKSLQNQVLSASNALMNADFTST
SSNKACVGLSKHESFKALANKTYILLGN
MRKAFTVLELIFVIVILGILAAIALPRFSSSKDEAEISKALSNLKTMISDFNTYALKNDELSSTGVMSSISAIENVDLNN
ISLKEVNFKVSNDDECLKLIFMNESNILAFGIASNDNVKNLIQNLIRLQNQAIDKAKDKSLQNQVLSASNALMNADFTST
SSNKACVGLSKHESFKALANKTYILLGN
Nucleotide
Download Length: 567 bp
>NTDB_id=238575 CAV_RS05940 WP_094325609.1 1163394..1163960(+) (ctsG) [Campylobacter avium LMG 24591]
ATGAGAAAGGCTTTTACTGTTTTAGAACTTATATTTGTGATAGTGATTTTAGGAATTTTAGCTGCCATTGCCCTGCCTAG
ATTTAGCTCTAGCAAAGATGAGGCTGAAATCAGCAAGGCACTTTCTAATCTTAAAACCATGATTAGCGATTTTAACACCT
ATGCCCTAAAAAATGATGAACTATCTAGCACCGGGGTTATGAGCTCCATTTCTGCCATTGAAAATGTGGATTTAAACAAC
ATAAGCTTAAAAGAGGTGAATTTTAAAGTATCAAATGATGATGAGTGTTTGAAACTAATCTTTATGAACGAAAGCAACAT
ACTAGCCTTTGGCATAGCAAGCAATGATAATGTAAAAAATCTCATACAAAATCTCATAAGACTTCAAAACCAAGCCATAG
ACAAGGCAAAGGACAAGAGCTTACAAAATCAGGTCTTATCAGCTAGCAACGCCTTGATGAATGCTGATTTTACAAGCACT
TCAAGCAATAAAGCCTGCGTTGGATTAAGCAAACACGAAAGTTTCAAAGCCTTAGCAAATAAAACCTACATCCTGCTTGG
AAATTAA
ATGAGAAAGGCTTTTACTGTTTTAGAACTTATATTTGTGATAGTGATTTTAGGAATTTTAGCTGCCATTGCCCTGCCTAG
ATTTAGCTCTAGCAAAGATGAGGCTGAAATCAGCAAGGCACTTTCTAATCTTAAAACCATGATTAGCGATTTTAACACCT
ATGCCCTAAAAAATGATGAACTATCTAGCACCGGGGTTATGAGCTCCATTTCTGCCATTGAAAATGTGGATTTAAACAAC
ATAAGCTTAAAAGAGGTGAATTTTAAAGTATCAAATGATGATGAGTGTTTGAAACTAATCTTTATGAACGAAAGCAACAT
ACTAGCCTTTGGCATAGCAAGCAATGATAATGTAAAAAATCTCATACAAAATCTCATAAGACTTCAAAACCAAGCCATAG
ACAAGGCAAAGGACAAGAGCTTACAAAATCAGGTCTTATCAGCTAGCAACGCCTTGATGAATGCTGATTTTACAAGCACT
TCAAGCAATAAAGCCTGCGTTGGATTAAGCAAACACGAAAGTTTCAAAGCCTTAGCAAATAAAACCTACATCCTGCTTGG
AAATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsG | Campylobacter jejuni subsp. jejuni 81-176 |
55.319 |
100 |
0.553 |