Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   C5P47_RS07805 Genome accession   NZ_CP028140
Coordinates   1534956..1535435 (-) Length   159 a.a.
NCBI ID   WP_232817537.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS979     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1529956..1540435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5P47_RS07785 (C5P47_07770) - 1530134..1530739 (-) 606 WP_110410839.1 response regulator transcription factor -
  C5P47_RS07790 (C5P47_07775) - 1530720..1532282 (-) 1563 WP_110410840.1 hypothetical protein -
  C5P47_RS07795 (C5P47_07780) - 1532322..1534220 (-) 1899 WP_110410841.1 FtsX-like permease family protein -
  C5P47_RS07800 (C5P47_07785) - 1534222..1534959 (-) 738 WP_110410842.1 ABC transporter ATP-binding protein -
  C5P47_RS07805 (C5P47_07790) rcrQ 1534956..1535435 (-) 480 WP_232817537.1 ATP-binding cassette domain-containing protein Regulator
  C5P47_RS07810 (C5P47_07795) - 1535491..1537116 (-) 1626 WP_110410844.1 DUF4135 domain-containing protein -
  C5P47_RS07815 (C5P47_07800) - 1537199..1537354 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  C5P47_RS07820 (C5P47_07805) lacG 1537857..1539263 (-) 1407 WP_110410845.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18606.31 Da        Isoelectric Point: 6.6336

>NTDB_id=238371 C5P47_RS07805 WP_232817537.1 1534956..1535435(-) (rcrQ) [Streptococcus pyogenes strain NGAS979]
MFDGDVMYNISLGRESVTEKQVIETCKRVSLYEDIRCMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=238371 C5P47_RS07805 WP_232817537.1 1534956..1535435(-) (rcrQ) [Streptococcus pyogenes strain NGAS979]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAACCTGTAA
AAGGGTATCGCTATATGAGGATATCAGGTGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(43-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371