Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | Aba7804_RS03070 | Genome accession | NZ_CP022283 |
| Coordinates | 643878..644303 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain 7804 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 638878..649303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba7804_RS03060 (Aba7804_03055) | - | 639534..643387 (+) | 3854 | Protein_582 | PilC/PilY family type IV pilus protein | - |
| Aba7804_RS03065 (Aba7804_03060) | - | 643400..643881 (+) | 482 | Protein_583 | type IV pilin protein | - |
| Aba7804_RS03070 (Aba7804_03065) | pilE | 643878..644303 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| Aba7804_RS03075 (Aba7804_03070) | rpsP | 644450..644701 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba7804_RS03080 (Aba7804_03075) | rimM | 644721..645269 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba7804_RS03085 (Aba7804_03080) | trmD | 645315..646055 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba7804_RS03090 (Aba7804_03085) | rplS | 646263..646631 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba7804_RS03095 (Aba7804_03090) | - | 646684..647625 (-) | 942 | WP_085943974.1 | lipase family alpha/beta hydrolase | - |
| Aba7804_RS03100 (Aba7804_03095) | - | 647740..648771 (-) | 1032 | WP_001189457.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=237928 Aba7804_RS03070 WP_000788337.1 643878..644303(+) (pilE) [Acinetobacter baumannii strain 7804]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=237928 Aba7804_RS03070 WP_000788337.1 643878..644303(+) (pilE) [Acinetobacter baumannii strain 7804]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |