Detailed information NTG0023528

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SPS_RS08865
• Genome accession: NC_004606
• Coordinates: 1723773..1725041 (+)
• Length: 422 a.a.
• NCBI ID: WP_011055043.1
• Uniprot ID: A0A0H2UWN9
• Organism: Streptococcus pyogenes SSI-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1718773..1730041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPS_RS08840 (SPs1709)	-	1718941..1719690 (-)	750	WP_011055039.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
SPS_RS08845 (SPs1710)	prmA	1719690..1720643 (-)	954	WP_011055040.1	50S ribosomal protein L11 methyltransferase	-
SPS_RS08850 (SPs1711)	-	1720714..1721184 (-)	471	WP_002987990.1	DUF3013 family protein	-
SPS_RS08855 (SPs1712)	pabB	1721384..1723141 (+)	1758	WP_032461371.1	aminodeoxychorismate synthase component I	-
SPS_RS08860 (SPs1713)	-	1723174..1723740 (+)	567	WP_011055042.1	aminodeoxychorismate/anthranilate synthase component II	-
SPS_RS08865 (SPs1714)	rarA	1723773..1725041 (+)	1269	WP_011055043.1	replication-associated recombination protein A	Machinery gene
SPS_RS08875	-	1725609..1726300 (+)	692	Protein_1728	exotoxin beta-grasp domain-containing protein	-
SPS_RS10585	-	1726717..1726851 (-)	135	WP_011018269.1	hypothetical protein	-
SPS_RS08885 (SPs1716)	-	1727030..1728658 (+)	1629	WP_011055046.1	ABC transporter substrate-binding protein	-
SPS_RS08890 (SPs1717)	-	1728771..1729748 (+)	978	WP_032461372.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46600.07 Da
• Isoelectric Point: 6.5101

>NTDB_id=23528 SPS_RS08865 WP_011055043.1 1723773..1725041(+) (rarA) [Streptococcus pyogenes SSI-1]
MPDHLALRMRPKTISEVIGQKHLVGQGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=23528 SPS_RS08865 WP_011055043.1 1723773..1725041(+) (rarA) [Streptococcus pyogenes SSI-1]
ATGCCTGATCACTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCCAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGTATCGGGAAGACTT
CTATTGCTTCTGCTATTGCTGGTACTACTAAATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAAACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGACATTAT
GATGTGCTATCAGCCCTCCAAAAAGCTATTCGCGGCTCCGATGTCAATGCCAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCCCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

3D structure

• AlphaFold DB: A0A0H2UWN9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.233	98.815	0.585