Detailed information NTG0234206

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: BB162_RS00945
• Genome accession: NZ_CP021869
• Coordinates: 147003..147935 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138503.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain SG-M6
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 142003..152935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BB162_RS00925 (BB162_00925)	-	142216..143874 (+)	1659	WP_001118750.1	peptide ABC transporter substrate-binding protein	-
BB162_RS00930 (BB162_00930)	-	143989..144903 (+)	915	WP_000598967.1	ABC transporter permease	-
BB162_RS00935 (BB162_00935)	-	144913..145944 (+)	1032	WP_000764053.1	ABC transporter permease	-
BB162_RS00940 (BB162_00940)	oppD	145957..147006 (+)	1050	WP_000410289.1	ABC transporter ATP-binding protein	Regulator
BB162_RS00945 (BB162_00945)	amiF	147003..147935 (+)	933	WP_000138503.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34869.74 Da
• Isoelectric Point: 6.8964

>NTDB_id=234206 BB162_RS00945 WP_000138503.1 147003..147935(+) (amiF) [Streptococcus agalactiae strain SG-M6]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNKPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=234206 BB162_RS00945 WP_000138503.1 147003..147935(+) (amiF) [Streptococcus agalactiae strain SG-M6]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGCGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAAACCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.355	0.539
amiF	Streptococcus thermophilus LMG 18311	53.896	99.355	0.535
amiF	Streptococcus salivarius strain HSISS4	54.098	98.387	0.532