Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CCZ24_RS03235 Genome accession   NZ_CP021773
Coordinates   623906..625660 (+) Length   584 a.a.
NCBI ID   WP_000851088.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain B105     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 618906..630660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS03220 (CCZ24_03170) - 619271..621343 (-) 2073 WP_000726928.1 bifunctional metallophosphatase/5'-nucleotidase -
  CCZ24_RS03225 (CCZ24_03175) - 621612..622052 (+) 441 WP_000431168.1 MarR family transcriptional regulator -
  CCZ24_RS03230 (CCZ24_03180) rcrP 622099..623916 (+) 1818 WP_000481812.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS03235 (CCZ24_03185) rcrQ 623906..625660 (+) 1755 WP_000851088.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS03240 (CCZ24_03190) - 625768..626394 (+) 627 WP_000449644.1 GTP pyrophosphokinase -
  CCZ24_RS03245 (CCZ24_03195) - 626396..627082 (+) 687 WP_001264417.1 response regulator transcription factor -
  CCZ24_RS03250 (CCZ24_03200) - 627082..628311 (+) 1230 WP_000489528.1 HAMP domain-containing sensor histidine kinase -
  CCZ24_RS03255 (CCZ24_03205) mvk 628427..629305 (+) 879 WP_000659719.1 mevalonate kinase -
  CCZ24_RS03260 (CCZ24_03210) mvaD 629287..630231 (+) 945 WP_000348822.1 diphosphomevalonate decarboxylase -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64482.76 Da        Isoelectric Point: 7.4327

>NTDB_id=233337 CCZ24_RS03235 WP_000851088.1 623906..625660(+) (rcrQ) [Streptococcus agalactiae strain B105]
MKTKSQKTSFFSNLSPYLKGYKLLFALAIVLATLSSLTTVIGPDRLKEMTDLMVKGLAGNIDLAKIGHIAGQLAVLYVLG
ALVSYLASFIVTTIIQKFAQGMRNAIADKINKIPLSYFDSHTQGDTLSRVTNDVDLMTQSFNQSLVTMVASTVLLVGSLI
MMFKTDWHLATTAIISVFSGFALSSIIMVKSQPLFKKQQVNLANISGYVEEIYSGHNIVTSHNARQQAKSDFQLLNDKLH
SSMWKSQFFSGIMMPLMQFIGNFGYVMVCVVGAMLAIKGTITMGTIVAFMTYVRIFTQPIGQIAQGITQLQSASAAMGRV
FEFLNETNMQEDKHKVLNLPKFKGHVSFEHVKFGYSDNKTIIHDFTSEAQPGQKVAIVGPTGAGKTTIVNLLMRFYDVNS
GSISIDDINIQDMKRSQVHDAFSMVLQDTWLFEGTIKENLIFNQTTISDDEVQEAAKAVGIHHFIMTLPKGYDTVLDDAV
TLSVGQKQLLTIARALLKNSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKDGNIIEQ
GNHDVLMSQSGFYADLYNSQFESA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=233337 CCZ24_RS03235 WP_000851088.1 623906..625660(+) (rcrQ) [Streptococcus agalactiae strain B105]
ATGAAAACTAAATCACAAAAAACGTCTTTTTTCTCTAATTTATCTCCGTACCTCAAAGGTTACAAACTTCTTTTTGCGTT
AGCAATTGTGTTAGCAACTTTATCAAGCTTGACAACAGTTATAGGACCAGACCGTCTTAAAGAGATGACGGATCTTATGG
TAAAAGGCTTGGCTGGTAATATTGACTTAGCCAAAATCGGTCATATTGCAGGGCAATTGGCAGTATTATATGTTTTAGGT
GCATTAGTATCCTATCTAGCAAGTTTTATTGTGACGACTATTATTCAAAAATTTGCTCAAGGTATGCGCAATGCTATTGC
TGATAAAATCAATAAAATACCTTTGAGTTATTTTGATAGCCATACTCAAGGTGATACTTTATCTCGTGTTACAAATGATG
TGGATTTGATGACACAGTCTTTTAACCAAAGTTTAGTTACTATGGTTGCATCTACAGTGTTATTGGTTGGTTCATTAATT
ATGATGTTCAAAACAGATTGGCATTTAGCAACAACGGCGATTATATCGGTATTTTCAGGATTCGCTCTTTCTTCAATCAT
TATGGTGAAGAGTCAGCCTTTATTTAAAAAGCAACAGGTGAATTTGGCTAATATATCTGGATATGTAGAAGAAATTTACT
CAGGACACAACATTGTTACTAGTCATAATGCAAGACAGCAGGCTAAGTCAGATTTTCAACTATTAAATGATAAACTTCAC
AGTTCCATGTGGAAATCACAATTTTTCTCTGGAATTATGATGCCTCTGATGCAGTTTATTGGTAATTTTGGTTATGTGAT
GGTGTGTGTGGTTGGTGCCATGTTAGCTATCAAAGGAACAATTACTATGGGTACAATTGTTGCTTTTATGACCTATGTTC
GTATTTTTACACAGCCTATTGGTCAGATTGCTCAAGGAATTACACAATTACAGTCTGCTAGTGCAGCCATGGGACGTGTT
TTTGAATTTTTAAATGAAACAAATATGCAAGAGGATAAACACAAAGTGTTAAATCTTCCTAAGTTTAAGGGGCATGTGTC
CTTTGAACATGTCAAGTTTGGTTATAGTGATAACAAGACTATTATTCATGACTTTACTTCGGAGGCACAGCCTGGTCAGA
AAGTTGCTATTGTAGGACCAACTGGCGCAGGTAAAACGACAATTGTTAATTTATTGATGCGTTTTTATGATGTTAATTCA
GGTAGTATTTCCATAGATGACATCAATATCCAAGACATGAAACGTAGTCAAGTTCATGATGCTTTCTCGATGGTTCTTCA
AGATACATGGTTGTTTGAGGGAACTATTAAAGAAAATTTGATTTTTAACCAGACGACAATCAGTGATGATGAGGTTCAAG
AAGCTGCTAAGGCAGTCGGTATACATCATTTTATAATGACACTACCTAAAGGGTATGATACTGTCCTTGATGACGCTGTG
ACATTGTCAGTTGGACAAAAGCAATTATTAACCATTGCTCGAGCTCTTTTGAAAAATTCTCCCTTACTTATCTTAGATGA
AGCAACTTCATCTGTTGATACACGTACAGAAGAGTTAATTCAAAAAGCTATGGACAAACTTATGGAAGGAAGAACATCAT
TTGTTATCGCACATCGTTTATCAACGATTAAAAACGCAGACTTGATTTTGGTCATGAAAGATGGGAATATCATTGAGCAA
GGCAATCATGATGTTTTGATGTCTCAAAGTGGTTTTTATGCTGATCTGTATAATTCTCAATTCGAATCAGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(364-510)

ABC transporter transmembrane region (ABC_membrane)

(26-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

75.952

98.973

0.752

Multiple sequence alignment