Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | BAS_RS18675 | Genome accession | NC_005945 |
| Coordinates | 3643822..3644601 (-) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis str. Sterne | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3609500..3683423 | 3643822..3644601 | within | 0 |
Gene organization within MGE regions
Location: 3609500..3683423
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAS_RS18525 (BAS3648) | - | 3609844..3611514 (-) | 1671 | WP_000823085.1 | ribonuclease J | - |
| BAS_RS18530 (BAS3650) | dapA | 3612280..3613158 (-) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| BAS_RS18535 (BAS3651) | dapG | 3613170..3614402 (-) | 1233 | WP_000692470.1 | aspartate kinase | - |
| BAS_RS18540 (BAS3652) | asd | 3614426..3615472 (-) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| BAS_RS18545 (BAS3653) | dpaB | 3615623..3616222 (-) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| BAS_RS18550 (BAS3654) | dpaA | 3616219..3617121 (-) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| BAS_RS18555 (BAS3655) | - | 3617396..3617647 (-) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| BAS_RS18560 (BAS3656) | - | 3617774..3619015 (-) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| BAS_RS18565 (BAS3657) | - | 3619102..3620001 (-) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| BAS_RS18570 (BAS3658) | pnp | 3620153..3622291 (-) | 2139 | WP_000076733.1 | polyribonucleotide nucleotidyltransferase | - |
| BAS_RS18575 (BAS3659) | rpsO | 3622452..3622721 (-) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| BAS_RS18580 (BAS3660) | ribF | 3622822..3623793 (-) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| BAS_RS18585 (BAS3661) | truB | 3623837..3624760 (-) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| BAS_RS18590 (BAS3662) | rbfA | 3624847..3625203 (-) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| BAS_RS18595 (BAS3663) | - | 3625219..3625500 (-) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| BAS_RS18600 (BAS3664) | infB | 3625497..3627557 (-) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| BAS_RS18605 (BAS3665) | - | 3627562..3627873 (-) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| BAS_RS18610 (BAS3666) | - | 3627874..3628146 (-) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| BAS_RS18615 (BAS3667) | nusA | 3628158..3629264 (-) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| BAS_RS18620 (BAS3668) | rimP | 3629282..3629752 (-) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| BAS_RS18625 (BAS3669) | - | 3630085..3634386 (-) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| BAS_RS18630 (BAS3670) | - | 3634511..3636211 (-) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| BAS_RS18635 (BAS3671) | rseP | 3636321..3637577 (-) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| BAS_RS18640 (BAS3672) | dxr | 3637594..3638736 (-) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| BAS_RS18645 (BAS3673) | cdsA | 3638760..3639551 (-) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| BAS_RS18650 (BAS3674) | uppS | 3639569..3640345 (-) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| BAS_RS18655 (BAS3675) | frr | 3640431..3640988 (-) | 558 | WP_000531498.1 | ribosome recycling factor | - |
| BAS_RS18660 (BAS3676) | pyrH | 3640991..3641713 (-) | 723 | WP_000042663.1 | UMP kinase | - |
| BAS_RS18665 (BAS3677) | tsf | 3641780..3642667 (-) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| BAS_RS18670 (BAS3678) | rpsB | 3642771..3643472 (-) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| BAS_RS18675 (BAS3679) | codY | 3643822..3644601 (-) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| BAS_RS18680 (BAS3680) | hslU | 3644679..3646070 (-) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| BAS_RS18685 (BAS3681) | hslV | 3646093..3646635 (-) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| BAS_RS18690 (BAS3682) | xerC | 3646678..3647577 (-) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| BAS_RS18695 (BAS3683) | trmFO | 3647643..3648947 (-) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| BAS_RS18700 (BAS3684) | topA | 3648998..3651076 (-) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| BAS_RS18705 (BAS3685) | dprA | 3651221..3652089 (-) | 869 | Protein_3699 | DNA-processing protein DprA | - |
| BAS_RS18710 (BAS3686) | sucD | 3652177..3653079 (-) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| BAS_RS18715 (BAS3687) | sucC | 3653100..3654260 (-) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BAS_RS18720 (BAS3688) | rnhB | 3654454..3655227 (-) | 774 | WP_001174712.1 | ribonuclease HII | - |
| BAS_RS18725 (BAS3689) | ylqF | 3655279..3656169 (-) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| BAS_RS18730 (BAS3690) | lepB | 3656190..3656741 (-) | 552 | WP_000711857.1 | signal peptidase I | - |
| BAS_RS18735 (BAS3691) | rplS | 3656843..3657187 (-) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| BAS_RS18740 (BAS3692) | trmD | 3657334..3658068 (-) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BAS_RS18745 (BAS3693) | rimM | 3658068..3658583 (-) | 516 | WP_000170268.1 | ribosome maturation factor RimM | - |
| BAS_RS18750 (BAS3694) | - | 3658704..3658931 (-) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| BAS_RS18755 (BAS3695) | rpsP | 3658946..3659218 (-) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| BAS_RS18760 (BAS3696) | ffh | 3659319..3660668 (-) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| BAS_RS18765 (BAS3697) | - | 3660681..3661013 (-) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| BAS_RS18770 (BAS3698) | ftsY | 3661146..3662135 (-) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| BAS_RS18775 (BAS3699) | smc | 3662151..3665720 (-) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| BAS_RS18780 (BAS3700) | rncS | 3665867..3666604 (-) | 738 | WP_001146873.1 | ribonuclease III | - |
| BAS_RS18785 (BAS3701) | acpP | 3666663..3666896 (-) | 234 | WP_000786062.1 | acyl carrier protein | - |
| BAS_RS18790 (BAS3702) | fabG | 3666966..3667706 (-) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| BAS_RS18795 (BAS3703) | fabD | 3667706..3668650 (-) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| BAS_RS18800 (BAS3704) | plsX | 3668665..3669657 (-) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| BAS_RS18805 (BAS3705) | fapR | 3669654..3670247 (-) | 594 | WP_000747352.1 | transcription factor FapR | - |
| BAS_RS18810 (BAS3706) | recG | 3670336..3672384 (-) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| BAS_RS18815 (BAS3707) | - | 3672674..3674350 (-) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| BAS_RS18820 (BAS3708) | - | 3674373..3674735 (-) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| BAS_RS18825 (BAS3709) | rpmB | 3675114..3675302 (+) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| BAS_RS18830 | spoVM | 3675375..3675455 (-) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| BAS_RS18835 (BAS3710) | - | 3675522..3676202 (-) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| BAS_RS18840 (BAS3711) | rpe | 3676302..3676946 (-) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| BAS_RS18845 (BAS3712) | rsgA | 3676949..3677830 (-) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| BAS_RS18850 (BAS3713) | prkC | 3678099..3680072 (-) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| BAS_RS18855 (BAS3714) | - | 3680081..3680833 (-) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| BAS_RS18860 (BAS3715) | rlmN | 3680838..3681926 (-) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| BAS_RS18865 (BAS3716) | rsmB | 3681931..3683265 (-) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=23314 BAS_RS18675 WP_000421288.1 3643822..3644601(-) (codY) [Bacillus anthracis str. Sterne]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=23314 BAS_RS18675 WP_000421288.1 3643822..3644601(-) (codY) [Bacillus anthracis str. Sterne]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |