Detailed information NTG0231467

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: S101441_RS09285
• Genome accession: NZ_CP021507
• Coordinates: 1782227..1783006 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101441
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1777227..1788006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101441_RS09265 (S101441_01877)	trmFO	1777920..1779227 (+)	1308	WP_069837510.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
S101441_RS09270 (S101441_01878)	xerC	1779295..1780209 (+)	915	WP_014479777.1	tyrosine recombinase XerC	-
S101441_RS09275 (S101441_01879)	clpQ	1780222..1780767 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
S101441_RS09280 (S101441_01880)	hslU	1780775..1782187 (+)	1413	WP_255220399.1	HslU--HslV peptidase ATPase subunit	-
S101441_RS09285 (S101441_01881)	codY	1782227..1783006 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
S101441_RS09290 (S101441_01882)	flgB	1783386..1783775 (+)	390	WP_014479778.1	flagellar basal body rod protein FlgB	-
S101441_RS09295 (S101441_01883)	flgC	1783775..1784227 (+)	453	WP_014479779.1	flagellar basal body rod protein FlgC	-
S101441_RS09300 (S101441_01884)	fliE	1784238..1784558 (+)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
S101441_RS09305 (S101441_01885)	fliF	1784604..1786214 (+)	1611	WP_046160402.1	flagellar basal-body MS-ring/collar protein FliF	-
S101441_RS09310 (S101441_01886)	fliG	1786227..1787243 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
S101441_RS09315 (S101441_01887)	fliH	1787236..1787988 (+)	753	WP_014479782.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=231467 S101441_RS09285 WP_003220850.1 1782227..1783006(+) (codY) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=231467 S101441_RS09285 WP_003220850.1 1782227..1783006(+) (codY) [Bacillus subtilis subsp. subtilis strain SRCM101441]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCTTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467