Detailed information NTG0231306

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: S101359_RS13505
• Genome accession: NZ_CP021500
• Coordinates: 2723471..2725864 (-)
• Length: 797 a.a.
• NCBI ID: WP_010789325.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SRCM101359
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2718471..2730864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101359_RS13470 (S101359_02661)	-	2719528..2720256 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
S101359_RS13475 (S101359_02662)	-	2720288..2721106 (+)	819	WP_088118501.1	transporter substrate-binding domain-containing protein	-
S101359_RS13480 (S101359_02663)	-	2721168..2721818 (+)	651	WP_010789323.1	ABC transporter permease subunit	-
S101359_RS13485 (S101359_02664)	-	2721837..2722493 (+)	657	WP_088117656.1	amino acid ABC transporter permease	-
S101359_RS13490 (S101359_02665)	-	2722531..2722662 (-)	132	WP_003325315.1	YrzQ family protein	-
S101359_RS13495 (S101359_02666)	-	2722687..2722878 (-)	192	WP_003325314.1	hypothetical protein	-
S101359_RS13500 (S101359_02667)	-	2722891..2723355 (-)	465	WP_088118502.1	PRC-barrel domain-containing protein	-
S101359_RS13505 (S101359_02668)	recD2	2723471..2725864 (-)	2394	WP_010789325.1	ATP-dependent RecD-like DNA helicase	Machinery gene
S101359_RS13510 (S101359_02669)	-	2725898..2726518 (-)	621	WP_088118503.1	tetratricopeptide repeat protein	-
S101359_RS13515 (S101359_02670)	mnmA	2726609..2727724 (-)	1116	WP_088117657.1	tRNA 2-thiouridine(34) synthase MnmA	-
S101359_RS13520 (S101359_02671)	-	2727758..2728900 (-)	1143	WP_088117658.1	cysteine desulfurase family protein	-
S101359_RS13525 (S101359_02672)	cymR	2728919..2729335 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
S101359_RS13530 (S101359_02673)	-	2729537..2730805 (+)	1269	WP_003325306.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89219.90 Da
• Isoelectric Point: 5.1233

>NTDB_id=231306 S101359_RS13505 WP_010789325.1 2723471..2725864(-) (recD2) [Bacillus atrophaeus strain SRCM101359]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=231306 S101359_RS13505 WP_010789325.1 2723471..2725864(-) (recD2) [Bacillus atrophaeus strain SRCM101359]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTA
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCAGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGACATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCGTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAATCGACCGGACTTCCGGCCGTGAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTGACAGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCACCCACCAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTC
GAAAAGGTCGTCACCAATGCTCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACTTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	92.095	100	0.921