Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   S101444_RS04735 Genome accession   NZ_CP021498
Coordinates   919331..920125 (+) Length   264 a.a.
NCBI ID   WP_021481166.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101444     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 914331..925125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101444_RS04705 (S101444_00926) sxzA 915171..916202 (+) 1032 WP_087614454.1 iron ABC transporter permease -
  S101444_RS04710 (S101444_00927) yfhB 916316..917197 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  S101444_RS04715 (S101444_00928) yfhC 917285..917869 (+) 585 WP_032723010.1 nitroreductase -
  S101444_RS04720 (S101444_00929) yfhD 917908..918099 (-) 192 WP_003233561.1 YfhD family protein -
  S101444_RS04725 (S101444_00930) yfhE 918166..918276 (-) 111 WP_003223230.1 YfhE family protein -
  S101444_RS04730 (S101444_00931) yfhF 918331..919242 (-) 912 WP_087614455.1 TIGR01777 family oxidoreductase -
  S101444_RS04735 (S101444_00932) recX 919331..920125 (+) 795 WP_021481166.1 recombination regulator RecX Regulator
  S101444_RS04740 (S101444_00933) yfhH 920127..920441 (+) 315 WP_049140592.1 YfhH family protein -
  S101444_RS04745 (S101444_00934) yfhI 920584..921777 (+) 1194 WP_003243500.1 MFS transporter -
  S101444_RS04750 (S101444_00935) sspK 921809..921961 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  S101444_RS04755 (S101444_00936) yfhJ 922086..922355 (+) 270 WP_003243789.1 YfhJ family protein -
  S101444_RS04760 (S101444_00937) yfhK 922500..923018 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  S101444_RS04765 (S101444_00938) spdL 923103..923435 (+) 333 WP_049140590.1 SdpC immunity protein SpdL -
  S101444_RS04770 (S101444_00939) ephM 923422..924282 (+) 861 WP_087614456.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31025.29 Da        Isoelectric Point: 6.6686

>NTDB_id=231107 S101444_RS04735 WP_021481166.1 919331..920125(+) (recX) [Bacillus subtilis subsp. subtilis strain SRCM101444]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=231107 S101444_RS04735 WP_021481166.1 919331..920125(+) (recX) [Bacillus subtilis subsp. subtilis strain SRCM101444]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996


Multiple sequence alignment