Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AB987_RS09195 | Genome accession | NZ_CP021347 |
| Coordinates | 1890642..1891067 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain B8300 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1885642..1896067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB987_RS09185 (AB987_1857) | pilY1 | 1886296..1890150 (+) | 3855 | WP_000768940.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AB987_RS09190 (AB987_1858) | pilY2 | 1890163..1890645 (+) | 483 | WP_001046418.1 | type IV pilin protein | Machinery gene |
| AB987_RS09195 (AB987_1859) | pilE | 1890642..1891067 (+) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| AB987_RS09200 (AB987_1860) | rpsP | 1891214..1891465 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AB987_RS09205 (AB987_1861) | rimM | 1891485..1892033 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AB987_RS09210 (AB987_1862) | trmD | 1892079..1892819 (+) | 741 | WP_049590827.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AB987_RS09215 (AB987_1863) | rplS | 1893027..1893395 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AB987_RS09220 (AB987_1864) | - | 1893447..1894388 (-) | 942 | WP_085943440.1 | triacylglycerol lipase | - |
| AB987_RS09225 (AB987_1865) | - | 1894503..1895534 (-) | 1032 | WP_002125597.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=230111 AB987_RS09195 WP_000788339.1 1890642..1891067(+) (pilE) [Acinetobacter baumannii strain B8300]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=230111 AB987_RS09195 WP_000788339.1 1890642..1891067(+) (pilE) [Acinetobacter baumannii strain B8300]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |