Detailed information NTG0023003

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SMU_RS09395
• Genome accession: NC_004350
• Coordinates: 1928615..1929880 (+)
• Length: 421 a.a.
• NCBI ID: WP_002262365.1
• Uniprot ID: -
• Organism: Streptococcus mutans UA159
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1923615..1934880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMU_RS09360	-	1924701..1924895 (+)	195	Protein_1819	hypothetical protein	-
SMU_RS10005	-	1924923..1925219 (-)	297	WP_002262359.1	LacI family DNA-binding transcriptional regulator	-
SMU_RS09370 (SMU.2049c)	-	1925281..1926024 (-)	744	WP_002262360.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
SMU_RS09375 (SMU.2050c)	prmA	1926025..1926978 (-)	954	WP_002262361.1	50S ribosomal protein L11 methyltransferase	-
SMU_RS09380 (SMU.2052c)	-	1927206..1927503 (-)	298	Protein_1823	LlsX family protein	-
SMU_RS09385 (SMU.2054c)	-	1927516..1927986 (-)	471	WP_002262363.1	DUF3013 family protein	-
SMU_RS09390 (SMU.2055)	-	1928134..1928625 (+)	492	WP_002262364.1	GNAT family N-acetyltransferase	-
SMU_RS09395 (SMU.2056)	rarA	1928615..1929880 (+)	1266	WP_002262365.1	replication-associated recombination protein A	Machinery gene
SMU_RS09410 (SMU.2057c)	-	1930287..1932202 (-)	1916	Protein_1827	heavy metal translocating P-type ATPase	-
SMU_RS09415 (SMU.2058)	-	1932301..1933095 (+)	795	WP_002262367.1	MerR family transcriptional regulator	-
SMU_RS09420 (SMU.2059c)	-	1933280..1934305 (-)	1026	WP_002262368.1	YeiH family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46370.74 Da
• Isoelectric Point: 6.5113

>NTDB_id=23003 SMU_RS09395 WP_002262365.1 1928615..1929880(+) (rarA) [Streptococcus mutans UA159]
MPNNLALRMRPRDISEVIGQKHLVGQGKIISRMVTANRLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATTDTKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGQIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKKAMQ
AALTDTERGFDFEVKLDDDALDFIAQATNGDLRSAYNSLDLAIMSTQPDDNGSRHITLDTVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTIIAYEDIGLANPDAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKAIADLHKSGTIPIPRHLRDGHYAGSKELGNAQDYLYPHAYPEKWVKQQYLPDKLKGANYFTA
NETGKYERALGANKDKIDKLS

Nucleotide

• Length: 1266 bp

>NTDB_id=23003 SMU_RS09395 WP_002262365.1 1928615..1929880(+) (rarA) [Streptococcus mutans UA159]
ATGCCAAATAACCTCGCACTTCGTATGCGCCCTCGAGATATCTCTGAAGTTATCGGACAAAAGCATCTAGTCGGTCAAGG
CAAGATTATTTCGCGAATGGTCACTGCTAACCGTCTGTCTTCCATGATTCTTTATGGCCCTCCCGGAATTGGAAAAACCT
CAATCGCTTCTGCCATCGCTGGTACAACCAAATTTGCCTTTCGTACCTTCAATGCAACAACCGACACTAAAAAACGCCTG
CAGGAAATTGCTGAAGAAGCTAAATTTTCAGGTGGTTTGGTCTTGCTCCTAGATGAAATTCATCGTCTAGATAAAACTAA
GCAAGATTTTCTTCTCCCCTTGTTGGAAAACGGACAAATTATCATGATTGGCGCAACCACTGAAAATCCCTTTTTCTCTG
TCACCCCTGCCATTCGCTCGCGTGTTCAGATTTTTGAGTTAGAGCCATTATCAAATGAGGATATCAAAAAAGCTATGCAA
GCAGCTCTGACAGATACAGAGCGCGGCTTTGATTTTGAAGTCAAATTAGATGATGATGCTCTTGACTTCATTGCGCAAGC
CACCAATGGCGACTTGCGCTCTGCCTATAATTCTCTTGATTTAGCCATCATGTCCACCCAGCCAGATGACAATGGTAGTC
GCCACATCACCTTAGACACTGTTGAAAACAGCCTACAGCGCAGCTACATTACCATGGACAAGGATGGTGATGGCCACTAT
GATGTCTTGTCCGCCTTACAAAAATCTATTCGCGGTTCAGATGTCAATGCCAGCCTTCACTATGCTGCCAGATTAATCGA
AGCTGGTGATCTGCCAAGTCTAGCTAGACGTTTAACCATTATTGCTTACGAAGATATCGGCTTAGCCAATCCTGATGCAC
AGATTCATACAGTGACAGCGCTGGAAGCAGCCCAAAAAATTGGTTTTCCTGAAGCCCGCATTTTAATTGCCAATGTTGTT
ATTGATTTAGCACTCTCACCTAAGTCTAATTCCGCTTATGTTGCTATGGACAAGGCCATTGCAGATCTTCATAAAAGCGG
CACGATCCCTATTCCTCGCCACTTACGTGATGGTCATTACGCTGGCAGTAAAGAATTGGGCAATGCCCAAGATTATCTCT
ACCCGCATGCCTATCCGGAAAAATGGGTTAAGCAGCAATATTTACCAGACAAACTCAAAGGAGCTAACTATTTTACTGCC
AATGAAACAGGTAAATACGAACGGGCACTGGGGGCTAACAAAGACAAGATTGATAAACTTTCATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-414)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.135	98.812	0.584