Detailed information NTG0227969

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: B6N60_RS17590
• Genome accession: NZ_CP021056
• Coordinates: 4162174..4163289 (-)
• Length: 371 a.a.
• NCBI ID: WP_390839477.1
• Uniprot ID: A0A975TBU2
• Organism: Richelia sinica FACHB-800 strain FACHB 800
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4157174..4168289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6N60_RS17570 (B6N60_03879)	rplL	4157410..4157796 (+)	387	WP_190603369.1	50S ribosomal protein L7/L12	-
B6N60_RS17575 (B6N60_03881)	-	4158036..4160456 (-)	2421	WP_190603371.1	type IV pilus secretin family protein	-
B6N60_RS17580 (B6N60_03882)	-	4160584..4161381 (-)	798	WP_190603373.1	pilus assembly protein PilO	-
B6N60_RS17585 (B6N60_03883)	-	4161378..4162169 (-)	792	WP_190603375.1	PilN domain-containing protein	-
B6N60_RS17590 (B6N60_03884)	pilM	4162174..4163289 (-)	1116	WP_390839477.1	type IV pilus assembly protein PilM	Machinery gene
B6N60_RS17595 (B6N60_03885)	-	4163457..4164755 (+)	1299	WP_190603377.1	ABC transporter substrate-binding protein	-
B6N60_RS17600 (B6N60_03886)	-	4164952..4166256 (-)	1305	WP_190603380.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
B6N60_RS17605 (B6N60_03887)	-	4166355..4166480 (-)	126	WP_190603381.1	photosystem II protein Y	-
B6N60_RS17610 (B6N60_03889)	-	4166734..4167372 (+)	639	WP_190603384.1	histidine phosphatase family protein	-
B6N60_RS17615 (B6N60_03890)	-	4167406..4167939 (-)	534	WP_190603386.1	gamma carbonic anhydrase family protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 40650.87 Da
• Isoelectric Point: 4.4000

>NTDB_id=227969 B6N60_RS17590 WP_390839477.1 4162174..4163289(-) (pilM) [Richelia sinica FACHB-800 strain FACHB 800]
MKAISNLSSLFGKSNKGVGIELAPERINIVQLRKQRQGVKLESLITVPVPEGMMVDGQISDPPGMAQIIQQAIAENQIKA
SRVATCVPGRDAIVRIIPVPAELDDKELRDMVLNHEAALYLPYPREEADVDYQKLGYFVDEDGIEKVQVLLVATRKEVTE
TYLNTFGEAGLTVDVLEINSFALIRTIRDQLRLFSPQEAAVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQLQAALSRA
MNLPATRDMDMLMGMTIPSSQPVDGNRTGMTGINPGMVAILKVLGELADELRRSIDFYLNQSENLEVAQILLAGPGGGLQ
QLDEFLTQRLSLPTTQIDPISSLSLQVDTDKYPQVNRPGLGIVLGLGMREV

Nucleotide

• Length: 1116 bp

>NTDB_id=227969 B6N60_RS17590 WP_390839477.1 4162174..4163289(-) (pilM) [Richelia sinica FACHB-800 strain FACHB 800]
GTGAAAGCCATAAGTAACTTAAGTAGTCTTTTTGGTAAATCCAATAAAGGAGTTGGCATTGAACTTGCGCCCGAACGAAT
CAATATTGTTCAACTACGTAAGCAACGCCAAGGCGTAAAATTGGAATCTTTAATTACAGTGCCAGTACCAGAGGGCATGA
TGGTTGATGGTCAAATTAGCGACCCTCCTGGTATGGCACAAATCATCCAACAGGCCATAGCAGAAAATCAAATCAAGGCA
TCTCGTGTGGCTACATGTGTGCCAGGACGAGATGCTATTGTCCGTATTATCCCTGTGCCGGCAGAGTTGGATGATAAAGA
GTTGCGGGATATGGTTTTAAACCATGAAGCAGCTTTATATTTGCCCTATCCTCGTGAAGAAGCAGATGTAGACTATCAGA
AACTTGGTTACTTTGTAGATGAAGATGGCATCGAAAAAGTACAGGTATTATTAGTTGCTACTCGGAAGGAGGTGACGGAA
ACATATCTTAATACATTTGGGGAAGCAGGATTAACTGTTGATGTTTTGGAAATTAACAGTTTTGCCTTAATTCGTACTAT
TCGAGACCAGTTAAGGTTATTTAGCCCCCAAGAAGCAGCGGTATTAGTTGATATTGAATTTGATAGTACAGAAATTGCCA
TTATTATCAATGGTGTGCCGCAATTTTCTCGGACTGTACCTATTGGCACCTATCAACTACAAGCAGCCTTATCTAGGGCT
ATGAACTTACCAGCAACAAGGGATATGGATATGTTAATGGGAATGACAATTCCTTCATCCCAACCTGTAGATGGTAATAG
AACAGGTATGACGGGAATTAATCCCGGTATGGTGGCAATTTTGAAAGTTTTGGGGGAATTAGCTGACGAATTGCGCCGTT
CCATAGATTTTTACTTGAATCAAAGTGAAAATTTAGAAGTAGCTCAAATTCTCTTGGCTGGACCTGGGGGTGGACTGCAA
CAGCTAGACGAATTCTTGACCCAACGATTAAGTTTGCCAACTACCCAAATAGATCCGATTAGTTCTTTGTCATTGCAGGT
AGATACAGATAAATATCCCCAAGTCAACCGTCCTGGTTTGGGGATAGTGCTTGGTCTAGGAATGCGGGAGGTGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (286-370)

• Type IV pilus assembly protein PilM; (PilM_2) (19-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.489	99.191	0.65