Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | B9T42_RS07965 | Genome accession | NZ_CP020957 |
| Coordinates | 1577138..1577437 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain C3948 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1572138..1582437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9T42_RS07940 (B9T42_07940) | gcvPA | 1573350..1574696 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| B9T42_RS07945 (B9T42_07945) | gcvT | 1574716..1575807 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| B9T42_RS07950 (B9T42_07950) | - | 1575966..1576490 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| B9T42_RS07955 (B9T42_07955) | - | 1576480..1576626 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| B9T42_RS07960 (B9T42_07960) | comGF | 1576723..1577220 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| B9T42_RS07965 (B9T42_07965) | comGE | 1577138..1577437 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| B9T42_RS07970 (B9T42_07970) | comGD | 1577424..1577870 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| B9T42_RS07975 (B9T42_07975) | comGC | 1577848..1578159 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| B9T42_RS07980 (B9T42_07980) | comGB | 1578173..1579242 (-) | 1070 | Protein_1499 | competence type IV pilus assembly protein ComGB | - |
| B9T42_RS07985 (B9T42_07985) | comGA | 1579214..1580188 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| B9T42_RS07990 (B9T42_07990) | - | 1580240..1580863 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| B9T42_RS07995 (B9T42_07995) | - | 1580860..1581189 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| B9T42_RS08000 (B9T42_08000) | - | 1581189..1582175 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| B9T42_RS08005 (B9T42_08005) | - | 1582172..1582375 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=227418 B9T42_RS07965 WP_000844413.1 1577138..1577437(-) (comGE) [Staphylococcus aureus strain C3948]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=227418 B9T42_RS07965 WP_000844413.1 1577138..1577437(-) (comGE) [Staphylococcus aureus strain C3948]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |