Detailed information NTG0022700

Bioinformatically predicted

Overview

• Name: pepF
• Type: Regulator
• Locus tag: LP_RS09415
• Genome accession: NC_004567
• Coordinates: 2007247..2009058 (-)
• Length: 603 a.a.
• NCBI ID: WP_011101688.1
• Uniprot ID: A0A0L7Y818
• Organism: Lactiplantibacillus plantarum WCFS1
• Function: degradation of XIP; competence shut-off (predicted from homology) Competence regulation

Genomic Context

Location: 2002247..2014058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP_RS09390 (lp_2220)	-	2002851..2003489 (+)	639	WP_003644620.1	copper homeostasis protein CutC	-
LP_RS09395 (lp_2221)	-	2003743..2004645 (-)	903	WP_003640877.1	RluA family pseudouridine synthase	-
LP_RS09400 (lp_2222)	-	2004642..2005445 (-)	804	WP_003640878.1	NAD kinase	-
LP_RS09405 (lp_2223)	-	2005442..2006104 (-)	663	WP_003640879.1	GTP pyrophosphokinase family protein	-
LP_RS09410 (lp_2224)	-	2006397..2007032 (+)	636	WP_011101687.1	DsbA family protein	-
LP_RS09415 (lp_2225)	pepF	2007247..2009058 (-)	1812	WP_011101688.1	oligoendopeptidase F	Regulator
LP_RS09420 (lp_2226)	-	2009136..2010221 (-)	1086	WP_011101689.1	competence protein CoiA	-
LP_RS09425 (lp_2227)	-	2010406..2011137 (-)	732	WP_003640883.1	adaptor protein MecA	-
LP_RS09430 (lp_2228)	spxA	2011273..2011671 (-)	399	WP_011101690.1	transcriptional regulator SpxA	-
LP_RS09435 (lp_2229)	-	2011958..2012701 (-)	744	WP_003644623.1	MBL fold metallo-hydrolase	-
LP_RS09440 (lp_2230)	-	2012842..2013342 (+)	501	WP_003640886.1	antibiotic biosynthesis monooxygenase	-

Sequence

Protein

• Length: 603 a.a.
• Molecular weight: 67707.73 Da
• Isoelectric Point: 4.8348

>NTDB_id=22700 LP_RS09415 WP_011101688.1 2007247..2009058(-) (pepF) [Lactiplantibacillus plantarum WCFS1]
MVATKQLPTRSAVPEELTWDLTPIYADQAAYEADIAQVKAAIPTVTALKETFTSSADTVLAGIQAVLALYRRLEKVAVYA
SLKSDQDTGNSTNAALDDQASSLTAKVSAATAWFEPAILELTPGELDTYLDENVDLRDYRHLLDTIRLQKGHVLSESEEA
LLAGASDIFGASAKTFGVLNNADFQFPTVKDDDGNPVKLSQGIYGVLLESVHPAVRREAFEALYKVYGQFRRTLASTLAS
QVKVHNFVAQAHHYPDARTAALAANQIPTAVYDSLVTSVDKHLDLLHRYVALRKQLLGVDQLHMYDMYTPLAPKPTTNYS
YQQAQATALQALKILGPDYLKHVKTAFASRWIDVVENQGKRSGAYSSGMYDTAPYMLLNWQDNIDNLYTLVHEMGHSMHS
YFTTHHQPYQYGDYSIFVAEIASTTNENLLTNYFLATEQDPKMRAYVLNYYLDGFKGTVFRQTQFAEFEQWLHEQDQEGQ
ALTADRLSKHYLQLNQRYYGDAVVSDPQIADEWSRIPHFYYNYYVYQYATGFAAASTLADRISTQQTDAVADYLGYLKAG
SSAFPIDVMHRAGVDMTKPDYLDAAFEVFEERLNEFEQLVTQD

Nucleotide

• Length: 1812 bp

>NTDB_id=22700 LP_RS09415 WP_011101688.1 2007247..2009058(-) (pepF) [Lactiplantibacillus plantarum WCFS1]
ATGGTAGCAACCAAACAATTGCCGACCCGTTCGGCCGTTCCTGAAGAATTGACGTGGGATTTGACGCCCATTTATGCAGA
TCAGGCCGCGTATGAGGCGGATATTGCACAAGTCAAAGCTGCAATCCCCACCGTCACTGCGCTTAAAGAAACGTTTACAA
GCTCGGCCGACACGGTGCTGGCTGGCATCCAGGCTGTTTTAGCGCTGTATCGTCGGTTAGAGAAAGTGGCGGTATACGCA
AGTCTGAAAAGTGACCAGGATACTGGCAATAGTACCAATGCGGCTTTAGACGATCAAGCTAGTAGTTTGACTGCCAAGGT
ATCCGCAGCGACTGCCTGGTTCGAACCAGCAATCTTGGAATTAACGCCGGGCGAATTGGATACGTACCTTGATGAAAACG
TCGATTTACGTGATTATCGGCATTTGTTGGATACGATCCGGTTGCAAAAGGGACACGTTCTGTCTGAAAGCGAAGAAGCT
TTACTCGCAGGCGCTAGTGATATTTTTGGTGCTTCTGCGAAAACTTTTGGTGTACTGAATAACGCTGACTTTCAATTTCC
AACGGTAAAGGATGACGACGGCAACCCTGTCAAATTGTCACAAGGAATTTATGGGGTGTTACTTGAGTCCGTTCATCCGG
CTGTTCGGCGAGAGGCGTTTGAAGCACTGTATAAAGTATACGGCCAGTTCCGGCGAACACTTGCTTCGACTTTAGCTAGC
CAAGTCAAGGTACACAATTTTGTTGCCCAGGCTCATCATTATCCAGATGCGCGGACGGCAGCACTTGCTGCCAATCAGAT
TCCGACGGCGGTTTACGATTCTTTAGTCACGTCCGTTGACAAGCATTTGGACTTATTGCACCGGTATGTTGCGTTACGGA
AACAACTGCTCGGAGTTGATCAGTTGCATATGTATGATATGTACACGCCATTGGCACCCAAGCCGACGACCAACTATTCC
TACCAGCAGGCTCAAGCAACTGCTTTACAAGCGCTCAAAATTTTGGGTCCTGATTATCTCAAACACGTCAAAACAGCGTT
TGCTTCACGGTGGATTGATGTGGTGGAAAATCAAGGCAAACGTAGCGGGGCGTATTCGTCAGGAATGTATGATACCGCGC
CATACATGCTGTTGAACTGGCAGGATAATATTGATAATTTATATACGTTGGTGCACGAAATGGGACACAGTATGCACTCT
TACTTCACGACACATCATCAGCCTTATCAGTATGGTGACTATTCAATTTTCGTGGCGGAAATTGCTTCAACGACTAATGA
AAACTTGTTGACGAACTATTTCTTAGCGACTGAACAAGATCCAAAAATGCGGGCGTATGTCTTGAATTACTACTTAGATG
GATTTAAAGGCACCGTTTTCCGGCAGACGCAATTTGCTGAGTTTGAACAGTGGCTTCATGAGCAAGATCAAGAAGGTCAG
GCTTTGACTGCCGATCGCTTGTCAAAACATTATTTGCAGTTGAACCAACGCTACTATGGTGACGCCGTCGTCAGTGATCC
GCAAATTGCCGACGAATGGTCCCGTATCCCGCATTTTTATTACAATTATTATGTTTATCAGTATGCCACGGGTTTTGCAG
CGGCCTCAACGTTGGCTGACCGTATTAGTACGCAACAGACAGATGCTGTTGCGGATTATCTCGGTTACTTGAAAGCTGGT
TCATCTGCTTTCCCAATCGATGTCATGCACCGAGCTGGAGTTGATATGACCAAGCCTGATTATCTTGATGCAGCTTTCGA
GGTATTTGAAGAACGATTAAATGAATTTGAACAGTTGGTCACCCAAGATTAA

Domains

Predicted by InterproScan.

• Oligopeptidase F (Peptidase_M3_N) (118-186)

• Peptidase family M3 (Peptidase_M3) (207-587)

3D structure

• AlphaFold DB: A0A0L7Y818

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pepF	Streptococcus salivarius strain HSISS4	51.515	98.507	0.507