Detailed information NTG0225021

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: B7P03_RS00520
• Genome accession: NZ_CP020618
• Coordinates: 112979..115402 (+)
• Length: 807 a.a.
• NCBI ID: WP_087436170.1
• Uniprot ID: -
• Organism: Staphylococcus hominis subsp. hominis strain K1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 107979..120402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7P03_RS00490 (B7P03_00485)	cymR	107986..108408 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
B7P03_RS00495	-	108518..108661 (+)	144	WP_017176172.1	SAS049 family protein	-
B7P03_RS00500 (B7P03_00490)	-	108760..109764 (-)	1005	WP_049336022.1	LLM class flavin-dependent oxidoreductase	-
B7P03_RS00505 (B7P03_00495)	-	109964..111103 (+)	1140	WP_087436168.1	cysteine desulfurase family protein	-
B7P03_RS00510 (B7P03_00500)	mnmA	111107..112219 (+)	1113	WP_064207356.1	tRNA 2-thiouridine(34) synthase MnmA	-
B7P03_RS00515 (B7P03_00505)	-	112306..112977 (+)	672	WP_087436169.1	tetratricopeptide repeat protein	-
B7P03_RS00520 (B7P03_00510)	recD2	112979..115402 (+)	2424	WP_087436170.1	ATP-dependent RecD-like DNA helicase	Machinery gene
B7P03_RS00525 (B7P03_00515)	alaS	115682..118312 (+)	2631	WP_087436171.1	alanine--tRNA ligase	-
B7P03_RS00530 (B7P03_00520)	-	118377..118637 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
B7P03_RS00535 (B7P03_00525)	ruvX	118638..119066 (+)	429	WP_002455257.1	Holliday junction resolvase RuvX	-
B7P03_RS00540 (B7P03_00530)	-	119081..119389 (+)	309	WP_071560662.1	DUF1292 domain-containing protein	-
B7P03_RS00545 (B7P03_00535)	-	119649..120284 (+)	636	WP_071560936.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91751.34 Da
• Isoelectric Point: 4.8582

>NTDB_id=225021 B7P03_RS00520 WP_087436170.1 112979..115402(+) (recD2) [Staphylococcus hominis subsp. hominis strain K1]
MPNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRIKTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHEPIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDITFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENSLNKDVLIIDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDKQINIDDKDDNNAVEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=225021 B7P03_RS00520 WP_087436170.1 112979..115402(+) (recD2) [Staphylococcus hominis subsp. hominis strain K1]
ATGCCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCCATGGCGATTTATCAATTTTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGCATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAAAACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGGCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACGGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCGCATCGCATGAAACATCATGAGCCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAACGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCAAATGATAACATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTC
TGGGCTAAAGAAAATTCACTTAACAAAGATGTACTGATTATCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTCATTATGCCTA
TTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGATGTAGAAGAGAATGATAAACAGATAAATATAGATGATAAAGATGATA
ATAATGCAGTTGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCG
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (340-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.378	99.628	0.492