Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   C2E46_RS07220 Genome accession   NZ_CP026082
Coordinates   1425495..1427234 (-) Length   579 a.a.
NCBI ID   WP_000323501.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain YZ1605     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1420495..1432234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2E46_RS07200 (C2E46_07450) - 1421173..1421583 (-) 411 WP_000594936.1 peptide deformylase -
  C2E46_RS07205 (C2E46_07455) gdhA 1421653..1423002 (-) 1350 WP_000200438.1 NADP-specific glutamate dehydrogenase -
  C2E46_RS07210 (C2E46_07460) - 1423170..1423679 (+) 510 WP_000870957.1 HdeD family acid-resistance protein -
  C2E46_RS07215 (C2E46_07465) rcrQ 1423721..1425490 (-) 1770 WP_001227941.1 ABC transporter ATP-binding protein Regulator
  C2E46_RS07220 (C2E46_07470) rcrP 1425495..1427234 (-) 1740 WP_000323501.1 ABC transporter ATP-binding protein Regulator
  C2E46_RS07225 (C2E46_07475) - 1427301..1427773 (-) 473 Protein_1364 GNAT family N-acetyltransferase -
  C2E46_RS07230 (C2E46_07480) - 1427770..1429638 (-) 1869 WP_001279332.1 ABC-F family ATP-binding cassette domain-containing protein -
  C2E46_RS07235 (C2E46_07485) - 1429649..1430857 (-) 1209 WP_001238955.1 CCA tRNA nucleotidyltransferase -
  C2E46_RS07240 (C2E46_07490) - 1431042..1431890 (-) 849 WP_001234244.1 DegV family protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64860.30 Da        Isoelectric Point: 6.2591

>NTDB_id=224519 C2E46_RS07220 WP_000323501.1 1425495..1427234(-) (rcrP) [Streptococcus agalactiae strain YZ1605]
MAYIWSYLKRYPNWLWLDLLGAMLFVTVILGMPTALAGMIDNGVTKGDRTGVYLWTFIMFIFVVLGIIGRITMAYASSRL
TTTMIRDMRNDMYAKLQEYSHHEYEQIGVSSLVTRMTSDTFVLMQFAEMSLRLGLVTPMVMIFSVVMILITSPSLAWLVA
VAMPLLVGVILYVAIKTKPLSERQQAMLDKINQYVRENLTGLRVVRAFARENFQSQKFQVANQRYTDTSTSLFKLTGLTE
PLFVQIIIAMIVAIVWFALDPLQRGAIKIGDLVAFIEYSFHALFSFLLFANLFTMYPRMVVSSHRIREVMDMPISINPNT
EGVTDTKLKGHLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YNLKSLRQKIGFIPQKALLFTGTIGENLKYGKADATIDDLRQAVDISQAKEFIESHQEAFETHLAEGGSNLSGGQKQRLS
IARAVVKDPDLYIFDDSFSALDYKTDATLRARLKEVTGDSTVLIVAQRVGTIMDADQIIVLDEGEIVGRGTHAQLIENNA
IYREIAESQLKNQNLSEGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=224519 C2E46_RS07220 WP_000323501.1 1425495..1427234(-) (rcrP) [Streptococcus agalactiae strain YZ1605]
ATGGCATATATTTGGTCTTATTTGAAAAGGTACCCAAATTGGTTATGGCTTGATTTACTAGGTGCTATGCTTTTTGTGAC
GGTTATCCTAGGAATGCCCACAGCCTTAGCAGGTATGATTGATAATGGCGTTACAAAAGGTGATCGGACTGGAGTTTATC
TGTGGACGTTCATCATGTTTATATTTGTTGTACTAGGTATTATTGGGCGTATTACGATGGCTTACGCATCTAGTCGCTTA
ACGACAACAATGATTAGAGATATGCGTAATGATATGTATGCTAAGCTTCAAGAATACTCCCATCATGAATATGAACAGAT
AGGTGTATCTTCACTAGTGACACGTATGACAAGCGATACTTTTGTTTTGATGCAATTTGCTGAAATGTCTTTACGTTTAG
GCCTAGTAACTCCTATGGTAATGATTTTTAGCGTGGTTATGATACTAATTACGAGTCCATCTTTGGCTTGGCTTGTAGCG
GTTGCAATGCCTCTTTTGGTAGGAGTTATTTTATATGTAGCTATAAAAACAAAACCTTTATCTGAAAGACAACAGGCTAT
GCTTGATAAAATCAATCAATATGTTCGTGAAAATTTAACAGGGTTACGCGTTGTTAGAGCCTTTGCAAGAGAGAATTTTC
AATCACAAAAATTTCAAGTCGCTAACCAACGTTACACAGATACTTCAACTAGTCTTTTTAAATTAACAGGGCTAACAGAA
CCACTTTTCGTTCAAATTATTATTGCAATGATTGTGGCTATCGTTTGGTTTGCTTTGGATCCCTTACAAAGAGGTGCTAT
TAAAATAGGGGATTTAGTTGCTTTTATCGAATATAGCTTCCATGCTCTCTTTTCATTTTTGCTATTTGCCAATCTTTTTA
CTATGTATCCTCGTATGGTGGTATCAAGCCATCGTATTAGAGAGGTGATGGATATGCCAATCTCTATTAATCCTAATACC
GAAGGTGTTACGGATACGAAACTCAAAGGGCATTTAGAATTTGATAATGTAACATTCGCTTATCCAGGAGAAACAGAGAG
TCCCGTTTTGCATGATATTTCTTTTAAAGCTAAGCCTGGAGAAACAATTGCTTTTATTGGTTCAACAGGTTCAGGAAAAT
CTTCTCTTGTTAATTTGATTCCACGTTTTTATGATGTGACACTTGGAAAAATCTTAGTAGATGGAGTTGATGTAAGAGAT
TATAACCTTAAATCACTTCGCCAAAAGATTGGATTTATCCCCCAAAAAGCTCTTTTATTTACAGGGACAATAGGAGAGAA
TTTAAAATATGGAAAAGCTGATGCTACTATTGATGATCTTAGACAAGCGGTTGATATTTCTCAAGCTAAAGAGTTTATTG
AGAGTCACCAAGAAGCCTTTGAAACGCATTTAGCTGAAGGTGGGAGCAATCTTTCTGGGGGTCAAAAACAACGGTTATCT
ATTGCTAGGGCTGTTGTTAAAGATCCAGATTTATATATTTTTGATGATTCATTTTCTGCTCTCGATTATAAGACAGACGC
TACTTTAAGAGCGCGTCTAAAAGAAGTAACCGGTGATTCTACAGTTTTGATAGTTGCTCAAAGGGTGGGTACGATTATGG
ATGCTGATCAGATTATTGTCCTTGATGAAGGCGAAATTGTCGGTCGTGGTACCCACGCTCAATTAATAGAAAATAATGCT
ATTTATCGTGAAATCGCTGAGTCACAACTGAAGAACCAAAACTTATCAGAAGGAGAGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(30-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.011

94.301

0.368