Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | B7L38_RS12865 | Genome accession | NZ_CP020578 |
| Coordinates | 2578213..2578647 (+) | Length | 144 a.a. |
| NCBI ID | WP_000993717.1 | Uniprot ID | A0AAN5WG10 |
| Organism | Acinetobacter baumannii strain SSA12 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2573213..2583647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L38_RS12845 (B7L38_12845) | - | 2574605..2575492 (+) | 888 | WP_001017314.1 | metal-dependent hydrolase | - |
| B7L38_RS12850 (B7L38_12850) | - | 2575623..2576213 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| B7L38_RS12855 (B7L38_12855) | - | 2576235..2577317 (+) | 1083 | WP_001246375.1 | TPM domain-containing protein | - |
| B7L38_RS12860 (B7L38_12860) | - | 2577311..2577871 (+) | 561 | WP_000258955.1 | TPM domain-containing protein | - |
| B7L38_RS12865 (B7L38_12865) | pilA | 2578213..2578647 (+) | 435 | WP_000993717.1 | pilin | Machinery gene |
| B7L38_RS12870 (B7L38_12870) | - | 2578705..2580015 (+) | 1311 | WP_000914629.1 | O-antigen ligase family protein | - |
| B7L38_RS12875 (B7L38_12875) | - | 2580123..2581751 (+) | 1629 | WP_001988049.1 | PglL family O-oligosaccharyltransferase | - |
| B7L38_RS12880 (B7L38_12880) | bfr | 2581793..2582257 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| B7L38_RS12885 (B7L38_12885) | - | 2582502..2582696 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| B7L38_RS12890 (B7L38_12890) | - | 2582906..2583289 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14873.98 Da Isoelectric Point: 8.1106
>NTDB_id=224331 B7L38_RS12865 WP_000993717.1 2578213..2578647(+) (pilA) [Acinetobacter baumannii strain SSA12]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=224331 B7L38_RS12865 WP_000993717.1 2578213..2578647(+) (pilA) [Acinetobacter baumannii strain SSA12]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
53.061 |
100 |
0.542 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae strain A1552 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae C6706 |
44.966 |
100 |
0.465 |
| pilA | Pseudomonas aeruginosa PAK |
41.558 |
100 |
0.444 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.366 |
98.611 |
0.437 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.431 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.553 |
97.917 |
0.417 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |